Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0683 |
Symbol | murC |
ID | 4077291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 731311 |
End bp | 732720 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638005980 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_612678 |
Protein GI | 99080524 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0186623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTG CCACCAAACT GCCCGGCGAC GTCGGCCCGA TCCATTTTGT CGGTATTGGC GGCATCGGGA TGTCTGGCAT CGCCGAGGTG CTTTTGAACC TTGGCTATGT GGTGCAGGGC TCGGATCTCA AGTCCTCCAG GATCACCCAG CGGCTCGAAC GCCTTGGCGC AACGATTTTT GAAGGCCAGC GCGCCGAGAA CCTCGAAGAT GCCGAGGTCG TGGTGATCTC GTCCGCGATC AAACCCGGCA ACGCCGAACT CGACGAAGCC CGCTTGCGTG GCTTGCCGGT GGTGCGCCGC GCTGAAATGC TGGCCGAGCT CATGCGGCTC AAGTCCAATA TTGCCATTGG CGGCACCCAC GGCAAAACCA CCACCACCAC CATGATGGCA GAGCTGATGG TGGCGGGTGG CTTTGATCCG ACCGTTGTGA ACGGAGGCAT CATTCATGCC TATGGGTCGA ACGCGCGGAT GGGGCAGGGC GAATGGATGG TGGTGGAGGC CGACGAGAGT GACGGCACCT TCAACCGTCT GCCTGCCACG ATCGCGGTTG TGACCAATAT CGACCCCGAG CACATGGAGC ATTGGGGCGA CTTTGATCGC CTGCGCGACG GATTTTATGA ATTTGTCTCC AACCTTCCGT TCTATGGTCT CGCGGTATGC TGTACCGACC ACGCCGAAGT ACAGGCGCTT GTTGGCCGGA TCACCGATCG CCGCGTTGTC ACCTACGGGT TCAACGCGCA GGCTGACGTG CGCGCGGTGA ACCTCACCTA CAAAGGAGGC GTGGCGCATT TCGACATCCT GCTGCAGGCT GAGGGTCAAA AAATCGAAGG CTGTACGCTG CCGATGCCTG GGGATCACAA TGTCTCCAAC GCGCTCTCTG CGGTGGCCGT CTGTCGTCAC CTCGGCATGA AGCGCGAAGA GATCCGCACA GCCCTTGCCG CCTTTGGTGG GGTCAATCGT CGCTTTACCA AAGTGGGCGA AGTGGATGGT GTCACCATCA TTGATGATTA CGGCCATCAC CCGGTGGAAA TTGCCGCCGT CCTCAAAGCT GCGCGACAAG CCATCGGCAC CGAGGGCGAG GGGCGCGTGA TCGCCGTCCA CCAGCCGCAC CGCTATTCGA GGCTCTCCAA CCTCTTTGAC GATTTCTGCG CCTGTTTCAA TGACGCCGAT GTCGTGGCCA TAGCCGAGGT GTTTGCCGCC GGCGAAGATC CCATCGAAGG TGCGAGCCGC GACGATCTGG TGGCAGGGTT GATCCGGCAT GGTCATCGCC ATGCCCGCGC GATCCTCAAC GAAGATGACC TGCTGCGCCT CGTGCGTGAA CAGACGCGCC CCGGTGACAT GGTGGTGTGC CTTGGTGCAG GGACGATTTC GGCATGGGCA AACGGATTGC CCGAGAGGCT TCGGGGGTGA
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Protein sequence | MTPATKLPGD VGPIHFVGIG GIGMSGIAEV LLNLGYVVQG SDLKSSRITQ RLERLGATIF EGQRAENLED AEVVVISSAI KPGNAELDEA RLRGLPVVRR AEMLAELMRL KSNIAIGGTH GKTTTTTMMA ELMVAGGFDP TVVNGGIIHA YGSNARMGQG EWMVVEADES DGTFNRLPAT IAVVTNIDPE HMEHWGDFDR LRDGFYEFVS NLPFYGLAVC CTDHAEVQAL VGRITDRRVV TYGFNAQADV RAVNLTYKGG VAHFDILLQA EGQKIEGCTL PMPGDHNVSN ALSAVAVCRH LGMKREEIRT ALAAFGGVNR RFTKVGEVDG VTIIDDYGHH PVEIAAVLKA ARQAIGTEGE GRVIAVHQPH RYSRLSNLFD DFCACFNDAD VVAIAEVFAA GEDPIEGASR DDLVAGLIRH GHRHARAILN EDDLLRLVRE QTRPGDMVVC LGAGTISAWA NGLPERLRG
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