| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0656 |
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| Symbol | |
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| ID | 4078169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 703380 |
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| End bp | 703982 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005953 |
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| Product | uracil-DNA glycosylase superfamily protein |
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| Protein accession | YP_612651 |
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| Protein GI | 99080497 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGCA ATACGGATGA GCTCAAGAAA GAGATCTCCG CCTGCCGGTT GTGCGCGGCC
CGGTTTGCCT CGACGCGGAC CGCGCATGAG CCGCGCCCGG TGGTGTGGTT TGAGCCAAGC
GCCCGGATAT TGATCGCAGG GCAGGCGCCG GGGATGCGGG TTCACCAAAG TGGACGCCCG
TTCACGGATT CCTCGGGCGA CCGGCTGCGA GAGTGGCTTG GCCTGAGCGA GGATTGCTTT
TACGACACCA GCCGCGTGGC CATTGTGCCC ATGGCCTTTT GTTTTCCCGG CTATGACGCC
AAAACAGCCG ATCTGCCGCC GCCCAGGATC TGTGGCGAGA CTTGGCATGA TCGGGTGATG
TCGGCGCTGG GGAAGCTGCG GCTGCGGATC CTCGTTGGCG GGCATGCGCA CCGCTATCAT
CTCGGAACCC GCCTTGGGGT CACCGAACTT GTGAAGGGCT GGCGCAGCTT GCCGGAGGGG
GTCTTTGCCT TGCCTCATCC CTCTTGGCGC AATACGGCTT GGTTGAAACG AAATCCCTGG
TTCGAAGCGG AGCTTCTTCC GGTTCTGCGC GCAAGGGTGA AGGAGCAGAT GCAACATGAC
TGA
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| Protein sequence | MQSNTDELKK EISACRLCAA RFASTRTAHE PRPVVWFEPS ARILIAGQAP GMRVHQSGRP
FTDSSGDRLR EWLGLSEDCF YDTSRVAIVP MAFCFPGYDA KTADLPPPRI CGETWHDRVM
SALGKLRLRI LVGGHAHRYH LGTRLGVTEL VKGWRSLPEG VFALPHPSWR NTAWLKRNPW
FEAELLPVLR ARVKEQMQHD
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