| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0655 |
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| Symbol | |
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| ID | 4078168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 702386 |
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| End bp | 703045 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638005952 |
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| Product | ABC transporter related |
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| Protein accession | YP_612650 |
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| Protein GI | 99080496 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAAT TCGTGAATGT CAGCAAATCC TTTTGGACCG GGACTCAGCG CAAGATTATC
CTGGACAAAG TCTCCTTCAC GGTGGAGCTT GGGACCTCGC TTGGCATTCT GGCCCCAAAC
GGGACCGGCA AGACGACGCT GATCAACATG ATGGCCGGCC TTGAGAAACC CGATGAGGGC
GAGATCTATC GCGGCTGCAA GATTTCCTTT CCGCTCGGGT TCATGGGCGG CGTTATCAAC
CGTCTCTCGG CCATGGAAAA CTGCCGCTAT ATCGCGCGTC TCTATGGTCT CGACCCGGAT
TATGTCGAAA GCTACTGTCG CTGGCTCTGT GGCTTGAACG AGTATTTCGA CCAACCGCTT
GGCACCTATT CTGCTGGCAT GAAATCGCGG TTTTCGTTTG CGCTCATGCT GGCGCTGGAC
TTCGACATCT ATTTGATCGA CGAAGGCATG CCCAGTTCCA CAGATGTGGA GTTCAACCGC
AAGGCGGGCA TCATCTTGCA AGAACGTCTC GAGACGACGA CAATCGTTAT TGTATCCCAC
CAGCCCCGTA CGCTGGAGAA ATTCGCCAAC ACCGCTGCTG TGTTGATGAA TGGACAACTC
CATATGTTTG AAACCTTGGA AGAAGCGAAA CAGCTCTATG ACTACGAAAC CCAAGGCTAA
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| Protein sequence | MLEFVNVSKS FWTGTQRKII LDKVSFTVEL GTSLGILAPN GTGKTTLINM MAGLEKPDEG
EIYRGCKISF PLGFMGGVIN RLSAMENCRY IARLYGLDPD YVESYCRWLC GLNEYFDQPL
GTYSAGMKSR FSFALMLALD FDIYLIDEGM PSSTDVEFNR KAGIILQERL ETTTIVIVSH
QPRTLEKFAN TAAVLMNGQL HMFETLEEAK QLYDYETQG
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