| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0653 |
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| Symbol | |
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| ID | 4078166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 699813 |
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| End bp | 700646 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005950 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_612648 |
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| Protein GI | 99080494 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TCGACATCAA TGGTCTCACC ATTGGCAATG ACTGTCCGCT GACGGTCATT
GCCGGTCCCT GCCAGCTGGA AAGCGCCGAC CACGCGCAAA TGATCGCGGG CAAGCTCAAG
GAGGCCTGCG ACGCTGCGGG CGCGCAATTC ATCTTCAAGG CCTCCTACGA CAAGGCCAAC
CGCACCTCAC TGTCGGGCAA GCGCGGCCTT GGCATCGACA AGGGCCTCGA AGTGCTCGCG
GGCGTGCGCG ACACCTTTGG CGTGCCGGTA CTGACTGATG TTCACACCGA GGCGCAGTGC
ATCGTTGCGG GGGACGTGGT TGATGTCCTG CAGATCCCCG CCTTTTTGTG CCGCCAGACT
GACATGTTGC TGGCCGCCGG TAACACCGGC AAGGCCGTGA ACATCAAAAA GGGCCAGTTT
CTCGCACCCT GGGACATGGA CAATGTTGTG GCCAAGGTCG AAAGCACCGG CAACGACAAG
ATCCTGCTGA CCGAACGCGG CACCTCCTTT GGCTACAACG CCTTGGTCGC AGATATGCGT
GGTCTGCCCC GCATGGCACA AACCGGCTAC CCGGTGGTCA TGGACGCCAC CCATTCGGTT
CAACAGCCGG GCGGTCAGGG GGGCTCGACA GGTGGTCAGC GAGAGTTCGC TCCGGTGATG
GCCCGCGCAG CCGTTTCTTT GGGCATTGCT TCCGTTTTCA TCGAAACACA CGAAGATCCG
GACAACGCGC CCTCGGACGG GCCGAATATG ATTTACCTCA AAGATATGCC GCAATTGATT
GAGACTTTGA TGGGCTTTGA CGCACTTGCC AAAGCCAACC CCATCCGCAT CTGA
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| Protein sequence | MKKIDINGLT IGNDCPLTVI AGPCQLESAD HAQMIAGKLK EACDAAGAQF IFKASYDKAN
RTSLSGKRGL GIDKGLEVLA GVRDTFGVPV LTDVHTEAQC IVAGDVVDVL QIPAFLCRQT
DMLLAAGNTG KAVNIKKGQF LAPWDMDNVV AKVESTGNDK ILLTERGTSF GYNALVADMR
GLPRMAQTGY PVVMDATHSV QQPGGQGGST GGQREFAPVM ARAAVSLGIA SVFIETHEDP
DNAPSDGPNM IYLKDMPQLI ETLMGFDALA KANPIRI
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