| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0641 |
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| Symbol | |
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| ID | 4076128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 683825 |
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| End bp | 685609 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005938 |
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| Product | peptidase M24 |
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| Protein accession | YP_612636 |
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| Protein GI | 99080482 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.117815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAAA ACTTTGATGT CACGGCCCGT CCCGAGCAGG GCCCGGCGCG CCTTGCCGCG
CTTCGCGCTG AGATGGAGCG AGACAAGATC GACGGTTTTT TGGTCCCGCG CGCCGATGCG
CATCAAGGCG AATACGTCGC CCCACGGGAT GAACGTCTGG CGTGGCTCAC CGGCTTTACC
GGCTCTGCGG GATTCTGCGC CGTGCTGCCG CATATTGCTG GCGTGTTTAT CGACGGGCGC
TATCGCACAC AGGTCAAAGG CCAAGTCGCG GATGTCTATA CCCCTGTTCC TTGGCCGGAT
GTGACTTTGG GCGATTGGCT GGTGGAGCAA CTGCCAGAGG GCGGGATTGT CGCCTATGAC
CCCTGGCTGC ATTCCCTGCA GGAGATCCGC GACCTGACCG AGCGGCTCGT CTCGTCGGAT
ATTTCACTGG TGGAAAGCGA CAATCTAGTA GACCGCATCT GGCCCGACCA GCCAGCGCCC
CCGATGCAAC CGGCTCGGGC GCATTCGGAG GACTATGCCG GAGAGAGCGC CGAGAAGAAG
GCTCAGCGCC TGGCCGAGGG CCTGCGTAAA AGCGGACAGT CCGCAGCGGT CATCACTCTT
CCAGACAGCA TCATGTGGCT CCTGAATATC CGTGGTTCTG ACATTCCGCG CAATCCGGTC
GCCCATGCTT TTGCGATCCT GCATGATGAC GCCCGAGTGG ACCTGTTTAT GGCAGCAGAG
AAGCTCTCTG AGCTCGTATT GGGCGCGCAT GTGACCCTAC ACGCGCCTGA TCGCTTTCTC
GAGGCCACAG CCGGCCTCAA TGGTCAGGTC GCGGTGGACG CGCGCAGCCT GCCACAGGCT
GTTGCACGGG TTTTGGGCGA CAGGCTGGCG GCGGTCGGAG ACCCCTGCGC CCTGCCAAAG
GCCCGCAAGA ACGCCGCCGA GATCGCAGGC AGCGCGGCCG CACATCTGCG CGATGGGGCT
GCCGTTGTCG AAACGCTGGC TTGGCTCGAT ACGCAGGAAC CGGGCACGAT TACCGAAATC
GACGTGGTCA AGACACTCGA AGGGTTCCGC GCGGCAGATC CCGCGTTGCG TGACATCAGC
TTTGAAACCA TCGCAGGGAC AGGCGCCAAT GGCGCAATCA TGCATTACCG TGTGACACAT
GATACCAATG CGACGCTCCA AGAGGGTCAT CTTCTGGTGC TCGACAGCGG CGGGCAATAT
CTCGATGGCA CCACCGACAT CACCCGCACC ATCGCCATTG GATCGCCGGG CCGTGAGGAA
GCCGAAGCCT TTACGCGCGT CCTGCAGGGC ATGATCGCGG TCTCCCGGTT GCGTTGGCCC
GAGGGGCGGT CCGGGCGCGA ACTTGAGGCT ATCGGCCGCC TGCCTCTCTG GATGGCTGGA
CAGGATTTCA ACCATGGGCT TGGTCATGGC GTCGGCGCCT TCCTCAGCGT ACATGAAGGA
CCGCAGGGTC TTTCCCGCAT TAATACGGTA CCGCTTGAGC CGGGCATGAT CCTGTCCAAC
GAGCCGGGCT ACTACCGGGA GGGCGCCTTT GGCATCCGGA TTGAAAACCT CGTAGTGGTA
GAAGAGGCCC CAGCCCTTGA CACCGCCGAC CCAGACCGCA AGATGCTCGC GTGGCGCACG
CTGACGTTTG CGCCCATCGA CCGCCGTTTG GTGGTGCCCG AGATGCTGAG CTCGGGGGAG
CGCGAGTGGC TCAATAGCTA TCACGCAGAG GTAAACCGCA CTATCGCGCC GCGCGTCAGC
GCCGCTGCGG CAGAGTGGTT GAACGCGGCC TGCGCGCCGC TGTGA
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| Protein sequence | MFQNFDVTAR PEQGPARLAA LRAEMERDKI DGFLVPRADA HQGEYVAPRD ERLAWLTGFT
GSAGFCAVLP HIAGVFIDGR YRTQVKGQVA DVYTPVPWPD VTLGDWLVEQ LPEGGIVAYD
PWLHSLQEIR DLTERLVSSD ISLVESDNLV DRIWPDQPAP PMQPARAHSE DYAGESAEKK
AQRLAEGLRK SGQSAAVITL PDSIMWLLNI RGSDIPRNPV AHAFAILHDD ARVDLFMAAE
KLSELVLGAH VTLHAPDRFL EATAGLNGQV AVDARSLPQA VARVLGDRLA AVGDPCALPK
ARKNAAEIAG SAAAHLRDGA AVVETLAWLD TQEPGTITEI DVVKTLEGFR AADPALRDIS
FETIAGTGAN GAIMHYRVTH DTNATLQEGH LLVLDSGGQY LDGTTDITRT IAIGSPGREE
AEAFTRVLQG MIAVSRLRWP EGRSGRELEA IGRLPLWMAG QDFNHGLGHG VGAFLSVHEG
PQGLSRINTV PLEPGMILSN EPGYYREGAF GIRIENLVVV EEAPALDTAD PDRKMLAWRT
LTFAPIDRRL VVPEMLSSGE REWLNSYHAE VNRTIAPRVS AAAAEWLNAA CAPL
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