Gene TM1040_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0640 
Symbol 
ID4076127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp683422 
End bp683763 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content52% 
IMG OID638005937 
Producthypothetical protein 
Protein accessionYP_612635 
Protein GI99080481 
COG category[S] Function unknown 
COG ID[COG2343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.228362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA TCACGATCCA AAAAGCAACA GGCCGATGGG TTGTGCGTTC TGGTGGCGCC 
ATTCTGGGCG AGACGGAGAA TGCACTGGAA TTGATCGAAG GCGATCTGGC CCCAGTGATC
TATTTCCCGC GCGAGGACAT CGCCATGGCG TTTCTCGACA AAACCGACAA AACAAGCCAT
TGCCCGCATA AAGGCGACGC CACTTATTAT TCAATTGTGA ATAGGTCCTC CACCGATGAA
AACGCAGTCT GGAGTTACGA AAACCCAATT GATGCAGTAT CGGAGATCAA AGGCCACCTG
GCTTTCATGC CGCTTGCCTC GGTGAAGGTG GAGCAACTCT GA
 
Protein sequence
MTKITIQKAT GRWVVRSGGA ILGETENALE LIEGDLAPVI YFPREDIAMA FLDKTDKTSH 
CPHKGDATYY SIVNRSSTDE NAVWSYENPI DAVSEIKGHL AFMPLASVKV EQL