| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0628 |
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| Symbol | |
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| ID | 4076115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 665754 |
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| End bp | 666878 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005925 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_612623 |
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| Protein GI | 99080469 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0997648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.458027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACACAG CAGCAATTAC CGGCACCGGG GTGTACACCC CGTCCGAACG CATCACCAAT
GCAGAACTGG TCAAGGCCTT TAACGCCTAT GTCGACCTGC AGAATGAGAA ACACGCCGAC
GAGATCGCCT CGGGCGCGCG CGAGCCGCTG CAATACTCAT CCGAGGAGTT CATCCTCAAG
GCCTCAGGCA TTGAGAGCCG TTTTGTCATG GACAAATCCG GCGTCCTCGA CCCGGAGGTG
ATGCACCCGC TCCTGCGCCA GCGCAGCGAT GACGAACCCG GGATCATGGC CGAAATGGCG
GTTGATGCCG CCAGACAGGC TCTCGCGCAG GCAGGAAAAT CGGCTGAGGA TGTGGATCTG
GTAATCTGTG CCGCCTCCAA TATGGAGCGC GCCTATCCTG CGGTGGCCAT CGAGATCCAG
CAGCTTCTCG GCATCCGGGG CTTTGCCTTT GACATGAACG TTGCCTGTTC CTCGGCCACC
TTTGGCATTC AGACCGCCGC CGACATGATC CGCTCGGGTT CCATTCGTGC AGCTCTTGTG
GTCAATCCCG AAATCTGTTC CGGCCACCTA GAGTGGCGCG ACCGCGATTG CCACTTCATT
TTTGGGGATG TTGCGACCGC CACCTTGATC GAGCGCAGCG AAGACGCCAC AAGCGCCCAT
TTCGAGATCC TCTCCACCCG TTGCGCCACA GAGTTCTCCA ACAACATCCG CAACAACAAC
GGCTACCTGC GCCGCTCGCG CCCCGATGGC GTTGCGGACC GTCGTGACAT GCAGTTCATG
CAAAACGGTC GCAAGGTGTT CAAGGAAGTG CTGCCAATGG TCAGCCAGCA CATCACCGAT
CATATGACCG CTGAAGGTGT CGGCGCTGCC GACCTTAAAC GGCTCTGGCT GCATCAGGCC
AACAAGACGA TGAATGATTT CATCGGTAAA AAGGTTCTGG GTCGCACGCC AGAGGCCGGA
GAACAGCCCA ATATCCTGCA AGACTATGCC AACACCTCTT CGGCCGGCTC GATCATTGCG
TTTTCAAAAT TCTCGGACGA TCTCGAGGCG GGCGACACGG GCCTGATCTG CTCTTTTGGG
GCGGGCTACT CGGTGGGCTC AGTGCTCGTG CGGCGCCACG GCTGA
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| Protein sequence | MYTAAITGTG VYTPSERITN AELVKAFNAY VDLQNEKHAD EIASGAREPL QYSSEEFILK
ASGIESRFVM DKSGVLDPEV MHPLLRQRSD DEPGIMAEMA VDAARQALAQ AGKSAEDVDL
VICAASNMER AYPAVAIEIQ QLLGIRGFAF DMNVACSSAT FGIQTAADMI RSGSIRAALV
VNPEICSGHL EWRDRDCHFI FGDVATATLI ERSEDATSAH FEILSTRCAT EFSNNIRNNN
GYLRRSRPDG VADRRDMQFM QNGRKVFKEV LPMVSQHITD HMTAEGVGAA DLKRLWLHQA
NKTMNDFIGK KVLGRTPEAG EQPNILQDYA NTSSAGSIIA FSKFSDDLEA GDTGLICSFG
AGYSVGSVLV RRHG
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