Gene TM1040_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0624 
Symbol 
ID4078137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp662612 
End bp662962 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content60% 
IMG OID638005921 
Productsecretion chaperone CsaA 
Protein accessionYP_612619 
Protein GI99080465 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR02222] export-related chaperone CsaA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.606293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACA TTTCCTTTGA TGACTTCCTG AAGGTCGACG TGCGCGTGGG GACTGTGGTG 
CGGGCCGAGC CCTATCCTGA AGCACGCCGC CCTGCGATCA AGATGTGGAT CGATTTTGGC
GATGAGATCG GGGAGCGCAA GTCCTCTGCG CAGGTGACGG CGCATTACGC GCCAGAATCC
TTGATCGGCA AGCAGGTGAT GGCGGTGGTG AACTTTCCGC CCCGCCAGAT CGGCAAATTC
ATGTCAGAAG TGCTTGTACT CGGCCTGCCG GATGAGAATG GTGAGATTGT TCTGATTGGC
CCTGATGGCG ATGTGTCCGC GCAGGTCCCG CGCGGGGGGC GGATGCACTG A
 
Protein sequence
MADISFDDFL KVDVRVGTVV RAEPYPEARR PAIKMWIDFG DEIGERKSSA QVTAHYAPES 
LIGKQVMAVV NFPPRQIGKF MSEVLVLGLP DENGEIVLIG PDGDVSAQVP RGGRMH