| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0623 |
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| Symbol | |
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| ID | 4078136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 661804 |
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| End bp | 662619 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638005920 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_612618 |
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| Protein GI | 99080464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.648438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATGA ATGAGATCGC AGCGCGAGGG TTGGTGCTTT TGGGCTGCGG CAAAATGGGA
TCCGCGATGC TCAAGGGCTG GCTCGAAGGG GGGCTGCCGC GTGAAGCTGT CTATGTAATG
GACCCCAACC CCTCCGACTG GCTCAAGGGA ACCGGCGTGC ATATCAACGC CACGGTGCCT
GAGCAGCCCG CAATCGTTCT GGTTGCGGTC AAGCCGCAGG TGATGGGCGC GGCGCTTCCT
TCTGCCAAAT CCTATGGGGG CGGTGGGACC CTGTTTATCT CCGTTGCGGC AGGCACACCG
ATTTCGACGT TTGAGACGAT GCTCGGTGAG AGCACCCCGA TTGTACGCGC CATGCCCAAC
ACACCCGCAG CCGTGGGGCG GGGCATTACG GCCCTCATCG GGAACGCCCA TGTGGATGAG
GCCAAGATGG CGCAGGCCGA CGCCCTGTTG CAGGCTGTGG GCCAGACGGT GCGGCTGGAC
GACGAAGGTC AGATGGATGC AGTCACCGGG GTGAGCGGAT CCGGCCCTGC CTATGTCTTC
CACCTCATTG AGACGCTGGC CGCTGCGGGT GTGGCGCAGG GTCTGCCCGA GCCGCTGGCG
ATGCAACTGG CCAAGGCCAC GGTTGCCGGA GCCGGGGCTC TGGCTGAGGC GGCAGAAGAG
GATCCCAGCG CGCTTCGGGT CAATGTGACC AGCCCGAATG GGACAACGCA GGCCGCGCTT
GAGGTCCTGA TGGATGAGGA GACAGGCTTC CCGCCGCTCC TGCAGCGCGC GGTTGCGGCA
GCGGCCAAGC GTTCGGAGGA ACTGTCCCGT GGCTGA
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| Protein sequence | MDMNEIAARG LVLLGCGKMG SAMLKGWLEG GLPREAVYVM DPNPSDWLKG TGVHINATVP
EQPAIVLVAV KPQVMGAALP SAKSYGGGGT LFISVAAGTP ISTFETMLGE STPIVRAMPN
TPAAVGRGIT ALIGNAHVDE AKMAQADALL QAVGQTVRLD DEGQMDAVTG VSGSGPAYVF
HLIETLAAAG VAQGLPEPLA MQLAKATVAG AGALAEAAEE DPSALRVNVT SPNGTTQAAL
EVLMDEETGF PPLLQRAVAA AAKRSEELSR G
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