| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0620 |
|---|
| Symbol | |
|---|
| ID | 4078133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 659408 |
|---|
| End bp | 660316 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638005917 |
|---|
| Product | prolipoprotein diacylglyceryl transferase |
|---|
| Protein accession | YP_612615 |
|---|
| Protein GI | 99080461 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase |
|---|
| TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.863429 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCAG AGATGATCCA ATTCCCGAAC CTGTCGCCGG AGATTTTCTC CGTCACGCTC
TTTGGAACCG AGTTCGCGCT GCGCTGGTAT GCGCTGGCCT ATATCGTTGG CATCCTGATC
GCATGGTTTC TGGCTGTGCG GGCGGTGAAA CGTCCGGCGC TCTGGGCCAA TGAGGCCCCG
CCGATGACCC CGCGCCAGGT CGAGGACCTG ATGACCTGGA TCATTCTTGG CGTGATCTTG
GGTGGGCGGA TCGGCTATGT GCTCTTTTAT CAACCCTCGG TCTATCTGCA AAACCCAGCA
CAGATCCTGC GGATCTGGGA GGGCGGCATG GCCTTTCACG GCGGCCTACT GGGGGTTGTG
CTCGCGTCCT GGTTTTATGC GCGAGCGCAC AATATCAACA AGCTGCAGAT CGCGGATCTC
GTCGCCCATG CGGTCGCACC GGGCCTCTTG CTGGGGCGGC TTGCGAATTT CGTAAATGCA
GAGCTCTGGG GGCGCGCAAC CGATCTGCCG TGGGGCGTTG CCTTTCCGGG CAGCGCCGCG
CAGAAGTGTG GTCAGGCTCT GGGCGAGATC TGCGCCCGCC ATCCCAGCCA ACTTTATGAG
GCCGCAATGG AAGGGCTGAT CCTTGGCGCC CTCATCCTGT GGATGGTCTA CCGGCGCCAA
GCGTTTCAAG CCCCCGGCCG TATCCTGGGC GTGTTCCTTG CGGGCTATGG TATTGCACGT
TTCATCGTCG AGTTCTTCCG CCAGCCGGAT GCGCAGTTCA TCTCCGAGGG CAACCCGCTG
GGTCTTGCCT GGCACATCGG CGGTTTCGGT CTCACGCAGG GACAGGCGCT CTCGATCCCG
ATGATCCTGA TTGGGCTGTG GTTCGTCTTG CGCGCCGGAA AAACTGACCT CCATGAGGTG
CGCGCATGA
|
|---|
| Protein sequence | MLAEMIQFPN LSPEIFSVTL FGTEFALRWY ALAYIVGILI AWFLAVRAVK RPALWANEAP
PMTPRQVEDL MTWIILGVIL GGRIGYVLFY QPSVYLQNPA QILRIWEGGM AFHGGLLGVV
LASWFYARAH NINKLQIADL VAHAVAPGLL LGRLANFVNA ELWGRATDLP WGVAFPGSAA
QKCGQALGEI CARHPSQLYE AAMEGLILGA LILWMVYRRQ AFQAPGRILG VFLAGYGIAR
FIVEFFRQPD AQFISEGNPL GLAWHIGGFG LTQGQALSIP MILIGLWFVL RAGKTDLHEV
RA
|
|---|
| |