| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0604 |
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| Symbol | |
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| ID | 4078642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 644794 |
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| End bp | 645282 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005901 |
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| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
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| Protein accession | YP_612599 |
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| Protein GI | 99080445 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
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| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.398952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.412392 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGACA TCAAAGTAGG GATCATCATG GGGAGCCAGT CCGACTGGCC CACGATGAAG
GAAGCAGCCA ACATCCTTGA CGAACTGGGC GTTGCCTATG AAACGCGGAT CGTTTCGGCT
CACCGCACGC CGGACCGGTT GTGGGACTAT GGCAAGACCG CAGCAGAGCG CGGCCTGCAT
GTGATTATCG CAGGCGCGGG CGGCGCGGCG CATTTGCCCG GCATGATGGC GTCAAAGACC
CGTGTGCCCG TGGTTGGCGT GCCCGTCCAG ACCCGTGCCT TGTCCGGTGT CGACAGCCTT
TATTCGATCG TGCAGATGCC CAAAGGATTT CCAGTTGCCA CCATGGCGAT TGGTGCCGCG
GGCGCTGCCA ACGCAGGCCT GATGGCCGCC GGCATTCTCG CCACCAGCGA CGCCGCGCTG
GCAGAACGTC TTGACGCCTG GCGCGACGCG CTTGCCGCCT CCATTCCCGA GGAGCCTACC
GATGACTGA
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| Protein sequence | MADIKVGIIM GSQSDWPTMK EAANILDELG VAYETRIVSA HRTPDRLWDY GKTAAERGLH
VIIAGAGGAA HLPGMMASKT RVPVVGVPVQ TRALSGVDSL YSIVQMPKGF PVATMAIGAA
GAANAGLMAA GILATSDAAL AERLDAWRDA LAASIPEEPT DD
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