| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0603 |
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| Symbol | |
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| ID | 4078641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 643704 |
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| End bp | 644801 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005900 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_612598 |
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| Protein GI | 99080444 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.094732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.303963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TCGACCAAAT CCTCGAACCC GGTGCCGTAA TCGGCATTCT GGGCGGTGGT
CAGCTTGGCC GGATGCTGTC GGTTGCAGCC TCCCGCCTTG GCTTCACCAC CCACATCTAC
GAGCCGGCCG CGAATCCGCC TGCGGGCCAT GTTGCGGATC GGGTCACAAC CGCTGCCTAT
GAGGATGAGG CGGCCTTGCG CGCCTTTGCA CAAACCGTGG ATGTGATCAC CTATGAGTTT
GAAAATATCC CCACCTCAGC GCTCGACATT CTCGAGGATC TGAAACCGAT CCGCCCCGGT
CGCGAGGCGC TTCGGGTGTC GCAGGACCGC CTGACGGAAA AGACCTTTCT GCAAGAGCTT
GGGCTGGCAA CAGCGCCCTT TGCAGAGGTG GATGATGCCG CCAGCCTTGA AGTTGCATTG
GAAAAGGTCG GCACGCCTTC GATCCTGAAA ACGCGGCGTT TTGGCTATGA TGGCAAGGGT
CAGATGCGCA TCATGCATCC CGAAGAAGCT CCGGAGGCCT TGGCCGCCAT GCAAGGAGCG
CCCGCGGTGC TCGAAGGGTT TGTCCCCTTC AGCCACGAGG TCTCGGTCAT CGCAGCCCGC
AGCCTCAATG GCAAAGTCGC CTGCTATGAT CCGGGCGAGA ACGTGCATCT CGAAGGCATC
CTCAGCACCA CCACCGTGCC CGCAAACCTC ACGACGGGTC AGAGCATGGA TGCGGTGCTG
ATGGCCGGTA AGATCCTGAA CGCCCTCGAT TACGTTGGTG TTCTGGCGGT CGAGATCTTT
GTCACCGCGC ATGGCCTAGT GGTCAATGAA ATCGCCCCGC GCGTGCACAA CTCGGGTCAC
TGGACGCAGG AAGGCTGCAC CATCGACCAG TTCGAACAGC ACATCCGGGC CATCACAGGC
TGGACCATCG GCAATGGCGC CCGTTACGCC GATGTTGTGA TGGAAAACCT GATTGGCGAG
GACGTGGGAC GTATCGCCGA TCTTGCACGC GATCCCGATT GCGCCATTCA TCTCTATGGC
AAGGCCGAAA CAAAGCCTGG CCGCAAGATG GGCCATGTAA ACCGTGTCAT CCACACCGAA
GGGCGCGAGG GCTACTGA
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| Protein sequence | MTDLDQILEP GAVIGILGGG QLGRMLSVAA SRLGFTTHIY EPAANPPAGH VADRVTTAAY
EDEAALRAFA QTVDVITYEF ENIPTSALDI LEDLKPIRPG REALRVSQDR LTEKTFLQEL
GLATAPFAEV DDAASLEVAL EKVGTPSILK TRRFGYDGKG QMRIMHPEEA PEALAAMQGA
PAVLEGFVPF SHEVSVIAAR SLNGKVACYD PGENVHLEGI LSTTTVPANL TTGQSMDAVL
MAGKILNALD YVGVLAVEIF VTAHGLVVNE IAPRVHNSGH WTQEGCTIDQ FEQHIRAITG
WTIGNGARYA DVVMENLIGE DVGRIADLAR DPDCAIHLYG KAETKPGRKM GHVNRVIHTE
GREGY
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