| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0602 |
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| Symbol | |
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| ID | 4078640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 642346 |
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| End bp | 643503 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005899 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_612597 |
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| Protein GI | 99080443 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
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| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.188787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.301393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG ATGGATACGT CACACTGCGT CTGGTGGGAG CAGATGTGCT GCGCGCAGAT
GGGCTGGAGC GCAGCGGGGC GCTGACCCTC GCCGACGGAC TTCTGCAAGA CGCATCAGGC
GCCAGAGAGG TGGATCTCAA CGGCTATCGC CTCCTTCCGG GGATTGTGGA CCTGCACGGA
GACGGGTTTG AACGCCACGT CGCCCCCCGC CGAGGCGCCA TGAAGCAAAT GGGCGAAGGG
ATCCGCGCCA CTGAGGCAGA GCTCGCTGCC AACGGCATTA CGACCGGAGT GCTGGCGCAA
TTCCTGTCGT GGGAAGGCGG ACTGCGTGGG GCCGAGTTTG CACATCAGGT CTTTGAGGGC
ATCCGCGAGG TGCGCAGCCA ATTGGTTACG GATCTGATCC CTCAGCTTCG ATTCGAGATC
CACCTGCTTG ACCTCTATGA CACGCTTCCT GCGCAAATTG CTGATTGGGA GGTGCCCTAT
GTGGTGTTCA ACGATCACCT CCCACACGAC AGGCTCGCGC AGGGGAAAAA GCCGCCGCGG
TTGACGGGGC AGGCGCTCAA GGCTGGGCGA AATCCTGAAA AGCACTTTGA GATGCTGCTT
GAGATGCACG CCCGCAGAGA CGAGGTTGGC CCCGCATTGG ACAGGCTGTG CAATCTTCTA
CGCCAAAATG GCATCTGCTT TGGCAGTCAT GATGATCATA GCGCGCAGGA TCGGGAAATC
TGGCGCGCGC GTGGCGCGCA TATCTCGGAG TTTCCGGAAA CCGCTGAGGC CGCAGAGGCC
GCCCGGAGTG CGGGAGATCA CATCATTCTC GGTTCCCCGA ATGTGGTGCG CGGTGGCAGC
CATAAGGGCA ATGCTTCGGC GGTGGAACTG ATCTCGATGG GACTCTGTGA TGCGCTGGCT
TCGGATTATC ACTATCCCAG CCCGCGCCGT GCGGCGCTTA TGCTGGCCAA AACCGGCCTG
CTGCCTTTGG AACAGGCCTG GGCGCTGGTC TCATCCGGCC CGGCAAAGAT CCTTGGTCTT
CACGATCGTG GAGTCCTGAC GGATGGGAAA CGCGCAGATC TGGTGATCCT TGACGAAAAC
AATCAGGTCG CGGCGACGCT TTCAGGCGGG CGCGTAAGCT ACATGAGCGG GGCTATTGCT
GCGCGCTTCT TGAGCTGA
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| Protein sequence | MSEDGYVTLR LVGADVLRAD GLERSGALTL ADGLLQDASG AREVDLNGYR LLPGIVDLHG
DGFERHVAPR RGAMKQMGEG IRATEAELAA NGITTGVLAQ FLSWEGGLRG AEFAHQVFEG
IREVRSQLVT DLIPQLRFEI HLLDLYDTLP AQIADWEVPY VVFNDHLPHD RLAQGKKPPR
LTGQALKAGR NPEKHFEMLL EMHARRDEVG PALDRLCNLL RQNGICFGSH DDHSAQDREI
WRARGAHISE FPETAEAAEA ARSAGDHIIL GSPNVVRGGS HKGNASAVEL ISMGLCDALA
SDYHYPSPRR AALMLAKTGL LPLEQAWALV SSGPAKILGL HDRGVLTDGK RADLVILDEN
NQVAATLSGG RVSYMSGAIA ARFLS
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