| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0576 |
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| Symbol | |
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| ID | 4076141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 613567 |
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| End bp | 614076 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005873 |
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| Product | CarD family transcriptional regulator |
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| Protein accession | YP_612571 |
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| Protein GI | 99080417 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000504519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000218406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACCAAAT CGAAGAAGCT CGAATTCCGC CCCAATGATT TCATTGTATA CCCAGCCCAT
GGCGTTGGGC AGATCATTTC GATCGAGGAG CAGGAAGTGG CCGGCTACAA GCTGGAGCTT
TTCGTAATCA CCTTTGAAAA AGACAAGATG ACCCTGCGCG TGCCGACGCA TAAGGCCATC
GACATCGGCA TGCGTTCGCT GTCTTCCCCT GATGTGATCA ATCAGGCGAT GAAGACGCTG
AAAGGCAAGG CCAAGGTCAA GCGCGCCATG TGGTCGCGTC GGGCACAGGA ATACGAACAG
AAGATCAATT CCGGCGATCT GATCTCCATT GCCGAAGTGG TGCGCGACCT GCACCGTACC
GATGATCAGC GCGAGCAGAG CTATTCCGAG CGTCAGTTGT ATGAAGCCGC GCTCGAGCGT
CTGACCCGCG AAGTTGCGGC CGTGTCCGGT GGCGACGAAA TCGCGGCGGC CAAGCAGGTT
GATGAGGTCC TGACCTCCCG CGCTGCCTGA
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| Protein sequence | MTKSKKLEFR PNDFIVYPAH GVGQIISIEE QEVAGYKLEL FVITFEKDKM TLRVPTHKAI
DIGMRSLSSP DVINQAMKTL KGKAKVKRAM WSRRAQEYEQ KINSGDLISI AEVVRDLHRT
DDQREQSYSE RQLYEAALER LTREVAAVSG GDEIAAAKQV DEVLTSRAA
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