| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0572 |
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| Symbol | |
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| ID | 4076137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 608877 |
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| End bp | 609461 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005869 |
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| Product | tetratricopeptide TPR_2 |
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| Protein accession | YP_612567 |
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| Protein GI | 99080413 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00850831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000040032 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGCAAAA CGCGGACGAA TCTCAAAGCT ATCGTGGCGG CAATCTCTCT TGGCGTCATC
CCTTGTTTGC CTTCAATTTC GATGGCGCAG GAAGACGCGC ATCGCATACC ACAAACCGAG
GCCGACCTGT TGGAGCGTTT GCGCGCCGCG GACCCGGCAG ACGCCGCACG GATAGCCCGC
GAGTTGCAGG CCGAGTGGAG CAAGAGCGGC TCGGCGGCGA TGGACCTTCT GTTGCGCCGG
GGGCGTGAGG CCATGGCGCG GCAGGATTGG CAAGCCGCCA TCGAGCATTT CACAGCCCTC
ACCGACCATG CGCCGGAGTT TGCCGAGGGC TGGTCAGAGC GGGCGCGCGC CTTCTTTAAC
GCGGAACTCT TTGGTCCCGC TGTTGCTGAT CTCGAGCGGG CCTTGGCCTT GAACCCCAAT
GACTTCAACG CCATCTTCGG CCTCGGGCAG GTGTTTGAGT TCTTTGGCGA TCCGGAGCGC
GCCTATGCCG CCTATGAGCG AGCCGAGGCT ATACATCCGC ATCACGAGGA AGTAACCAAG
GCTCTGGATC GGCTTTCCAC TAAGGTGGAG GGGCAGGCTC TCTAA
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| Protein sequence | MGKTRTNLKA IVAAISLGVI PCLPSISMAQ EDAHRIPQTE ADLLERLRAA DPADAARIAR
ELQAEWSKSG SAAMDLLLRR GREAMARQDW QAAIEHFTAL TDHAPEFAEG WSERARAFFN
AELFGPAVAD LERALALNPN DFNAIFGLGQ VFEFFGDPER AYAAYERAEA IHPHHEEVTK
ALDRLSTKVE GQAL
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