| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0570 |
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| Symbol | |
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| ID | 4076135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 607521 |
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| End bp | 608468 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005867 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_612565 |
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| Protein GI | 99080411 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0339831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000518617 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGAAA CCGCCCCCGC GCCCTATTTC AGCGAGATTG CGCGCGGCCC GGATCAGGTC
GAGGCCCATT GGCTGACCAC TCAGGATGGT CAGCGTATCC GCGCAGGCCT CTGGCGTAGC
CACGGTCCTT CTGCGGGCAC AATCCTGCTG TTTCCCGGTC GCACAGAATA CATCGAGAAA
TATGGCCCAC TGGCCATTGA CCTGACGGAT CGGGGTTTTG ACGTCCTGAC CGTGGACTGG
CGCGGACAGG GGCTTGCGGA TCGCAGCCTG AGCGATGGCC GCCTCGGGCA TGTTGCAGAA
TTTGGCGCGT TCCAGCTCGA CGTGGCGGCG CTGGTGGCGC ATGCCGAGGC CCTCAACTTG
CCACGCCCGT GGTATCTGCT GGGACATTCC ATGGGCGGCG CCATCGGCCT GCGGGCTCTC
CACGAGGGTC TGCCAGTTGC GGCCTGCGCC TTCACTGCCC CGATGTGGGC GATCCGCATT
CCCTTTGCGC TGCGACCGGC TGCCCGGCTT TTGGCGCGGT TTGGGACGGC GCTGGGTGTG
AGCGAGAAGC TGGTGCCCAC AACCACCATC GAACAATACG TCCAGGTCAC ACCCTTTGAG
GGCAACACGC TGACAAATGA CCCGGAAATG TACGCTTTCT TGCAGATGCA GATGACCCAG
CACCCCGAAT TGGCCCTCGG GGGGCCGACG GTACAATGGT TGTCTCAGGC CATGCTGGAG
TGCGCAGATC TGCGCGCGCG CCCCTCACCC GATGTGCCTT GCGTGACCTT TCTGGGGGAA
AACGAACAGA TCGTCGCCAC AGAGGCCATT CATGATCGCA TGGCACGCTG GCCATCAGGC
AAGCTCGAGA TGATCCCGGA CGCCCAGCAC GAAATCCTGA TGGAAATCCC TCAGACACGC
AGGCAGACCT GCGCCATCCT GACGGCGCAC TTCAAAAAAC ACGTCTAG
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| Protein sequence | MAETAPAPYF SEIARGPDQV EAHWLTTQDG QRIRAGLWRS HGPSAGTILL FPGRTEYIEK
YGPLAIDLTD RGFDVLTVDW RGQGLADRSL SDGRLGHVAE FGAFQLDVAA LVAHAEALNL
PRPWYLLGHS MGGAIGLRAL HEGLPVAACA FTAPMWAIRI PFALRPAARL LARFGTALGV
SEKLVPTTTI EQYVQVTPFE GNTLTNDPEM YAFLQMQMTQ HPELALGGPT VQWLSQAMLE
CADLRARPSP DVPCVTFLGE NEQIVATEAI HDRMARWPSG KLEMIPDAQH EILMEIPQTR
RQTCAILTAH FKKHV
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