| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0565 |
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| Symbol | |
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| ID | 4077916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 602298 |
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| End bp | 603287 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005862 |
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| Product | oxidoreductase-like |
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| Protein accession | YP_612560 |
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| Protein GI | 99080406 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00933503 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAAC CTATTCGTTG GGGCATTCTG GGAGCCGCGA AATTCGCGCG CGAGCATATG
GGGCCAGCCA TTCACGCTGC AAACGGTGCT GAACTTGCCG CTCTGGCCAC CTCAAGCGCG
GACAAAGCTG CGCCATTTCA ATCCTTTGCA CCCGGAATAG CAGTGCATGA AAGCTATGAG
GCGTTGCTCG CCGACCCGTT GATCGATGCG GTTTACATCC CGCTTCCAAA CCATCTCCAT
GTGGAGTGGG CGCTGAAGGC AATGCAGGCG GGCAAACATG TGCTGGTCGA AAAACCCGCG
ACGCTACGCG AGGAGGAGTT CGACCAGTTG ATTGCGGCGC GGGATGCGGC GGGTGTTCTT
GCAGCCGAAG CCTATATGAT CGTGCACCAC CCGCAATGGC AGCGCGCGCG CGAACTTGTG
CATACCGGTG CGCTGGGGCA GGTGAAGCAT GTCTCGGGGA AGTTCTCTTT TGACAATCGC
AGAGACGTCG ACAACATCCG CAATCGTCCG GAAACAGGGG GCGGCGCCCT GCGCGACATT
GGAGTCTATG TCTTGGGATC GGCACGCTTT GTCACCGGTG AGGAGCCGCA GGACATCAGT
GCGCAGATTG AATGGGAAAA CGGGGTGGAT GTGCTCTCTA ATGTGCAGGC GCGGTTCCCG
AGCTTTCTTT ATACGGCCTA TGTCAGCACC CGTTTGCAGC CCTTTCAGGA GATGGTGTTT
CACGGCGACA AAGGTGTATT GCGCCTCACA GCGCCCTTTA ATCCGCGGGT CTTTGGGGAG
GCACGGCTGG AGTTGCACCA GGCCTCCCAT GCGGCGGGAT CGGGACGCGT CATCGAGGAA
CGCTTCCCCA TTGCCGATCA CTATAAGCTG CAGGTTGAGG CCTTCGGAAA GAGTGTGCGC
GATGGCACGC CCTATGCCTG CCCGCTAGAG TTCTCGCGCG GGACGCAACG CGCGCTGGAT
CAGATTTTTG CCTGCGCCAC CACGCTCTGA
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| Protein sequence | MTQPIRWGIL GAAKFAREHM GPAIHAANGA ELAALATSSA DKAAPFQSFA PGIAVHESYE
ALLADPLIDA VYIPLPNHLH VEWALKAMQA GKHVLVEKPA TLREEEFDQL IAARDAAGVL
AAEAYMIVHH PQWQRARELV HTGALGQVKH VSGKFSFDNR RDVDNIRNRP ETGGGALRDI
GVYVLGSARF VTGEEPQDIS AQIEWENGVD VLSNVQARFP SFLYTAYVST RLQPFQEMVF
HGDKGVLRLT APFNPRVFGE ARLELHQASH AAGSGRVIEE RFPIADHYKL QVEAFGKSVR
DGTPYACPLE FSRGTQRALD QIFACATTL
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