| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0561 |
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| Symbol | |
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| ID | 4077912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 597039 |
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| End bp | 598208 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005858 |
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| Product | 4-hydroxybenzoate 3-monooxygenase |
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| Protein accession | YP_612556 |
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| Protein GI | 99080402 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02360] 4-hydroxybenzoate 3-monooxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.061935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.130471 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAC AGGTTGTAAT TGTTGGTGGC GGCCCATCAG GAATGCTGCT GGGACAGCTT
TTGCACCTCA ATGGCATCGA CACCATCGTC CTGGAACGAC GGACCAAGGA GCATGTGCTC
AGCCGCATTC GCGCCGGCAT CCTCGAGCAG GGCTTGGTTG AGCTGATGCA TAAAGCAGGC
GTCGGTGCGC GGCTCGAGCG CGAGAGCTTT CGCCATCACG GGACATTGAT TTCACACAAT
GACGAGATGT TCGGCATAAA TTTTGAGCGC CTGATCGGTA AATCGGTGAC GCTATATGGC
CAAACCGAGG TGACCCGCGA TCTCTATGAG GCGCGCGAAA GCGTTGGCGC GACCACGTTT
TTTGACGTCG AAGATGCCAC AATCCACGAT GCTGACACCG AGAGCCCCTA TGTCACCTTT
CAAAAGGACG GCAAAGAGAC TCGCATCGAT TGCGATTTCA TCGCGGGCTG CGACGGGTTT
CATGGTGTCA GCCGACGCAC GATCCCGGCC TCTGTCCGCA CGGAATACGA AAAAGTCTAT
CCCTTTGGCT GGCTCGGCAT CCTGTCCGAA ACCCCGCCCG TCAATGAGGA GTTGATCTAC
GCCAATTCAG AGGACGGGTT CGCGCTCTGT TCGATGCGCA ACGCCAATCT CAGCCGCTAT
TACGTTCAAT GCTCTCTGGG CGATGACGTG GGCGATTGGA CAGATACCCG GTTCTGGGAC
ACCCTGCGCC GCCGCCTGCC GAGCGAGGTC GCAGAGGCCC TGGTCACAGG CCCCTCGATC
GAGAAGTCCA TCGCACCGCT GCGCTCGTTT GTGAGCGAGC CAATGCGCTG GGGGCGGCTG
TTCCTCTGCG GCGATGCGGC TCATATCGTG CCGCCAACCG GGGCGAAGGG TCTGAATACT
GCCGCCTCGG ACGTGCATTA CCTCTACACG GGATTGATCC AGTATTATGA GGACAAAGAC
AGCGAAGGGA TCGATCGCTA CTCCGAAAAA GCCCTCGCCC GTGTTTGGAA GGCGGAGCGG
TTCAGCTGGT GGATGACGTC CTTGCTGCAT CGGTTCCCCG ACCAAGGTCC GTTTGACGTA
AAGATGCAGG CGGCAGAACT GGCGTTCCTG CGCGACAACA AGGACGCGCA ACGCGTGCTT
GCCACCAACT ATGTCGGGCT GCCTTACTGA
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| Protein sequence | MRTQVVIVGG GPSGMLLGQL LHLNGIDTIV LERRTKEHVL SRIRAGILEQ GLVELMHKAG
VGARLERESF RHHGTLISHN DEMFGINFER LIGKSVTLYG QTEVTRDLYE ARESVGATTF
FDVEDATIHD ADTESPYVTF QKDGKETRID CDFIAGCDGF HGVSRRTIPA SVRTEYEKVY
PFGWLGILSE TPPVNEELIY ANSEDGFALC SMRNANLSRY YVQCSLGDDV GDWTDTRFWD
TLRRRLPSEV AEALVTGPSI EKSIAPLRSF VSEPMRWGRL FLCGDAAHIV PPTGAKGLNT
AASDVHYLYT GLIQYYEDKD SEGIDRYSEK ALARVWKAER FSWWMTSLLH RFPDQGPFDV
KMQAAELAFL RDNKDAQRVL ATNYVGLPY
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