| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0543 |
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| Symbol | |
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| ID | 4077190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 575727 |
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| End bp | 577433 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005840 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612538 |
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| Protein GI | 99080384 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.655612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGC TCGCCGCATA TTCCAGCAGC AGCCGGTCCG AGGGCCGGCT GCTGTCGCTC
ATTCTGGTGC TGGCGGTTGT ACTCACCCTT GCACCGGTCG TGCGCCTGTT TGTTGAGGGT
CTCACCGCTG GCGATCAGTT GAATTTCGGA TTCTTTGCCG AAGTCTTGCA AAAACCCGCC
ACGCTCTCGG CGCTCAAACA TTCTCTGGTG ACGGCTGGAC TGGGCACTGC CCTTTCATTG
CTGATCGGGG GGTGTTTTGC CTTTCTGGTC GCGCTCACCG ATCTGCGCCG CAAGGGCGCG
CTGGTGTTTT GCCTGATGAT CCCGATGATG ATCCCACCTC AGATCACCGC CCTGTCGTGG
ACGCAGATCA TGGGGCCATC ATCGGTATTT CTCAAAACCC TTGGTCTCGC ACCGCCGCTC
GGCGCGCCTC AGCCTCTTTA TTCGCCTGCA GGGATTATTC TGCTGTTGGG CATTCAGCAT
ACGTCGATCA TCTTTTTGAC CCTGCGCGCC GGCCTTCGCG CGATCCCCCA GGATGTGGTC
GAGGCAGCGC GGGTTTCGGG TGCGAAGGGC TTTCGCATCT GGGCGCAAGT CGTGTTGCCC
CTCACCTTGC CAAGCCTTCT GGCCGGGGTC GCGATCACCT TTGTGACCGC ACTTGGGAAT
TTTGGCATTC CCGCGATGCT CGGTATTCCC GCAGGCTATG CCACCCTACC TACGTTGATT
TATCAACGAC TTGCCGGCAT GGGCACCACG GTTTTGGCCG AGGTTGCGGT TCTCGCCACC
CTCATCGGCG TGGTTGCGAT TGCAGGCATC CTGTTGCAGC GCTTCTGCCA GAGCCGACAG
CGCGTGCATC TGGTCGGCGG CTCCGGGCGC GCGCTCTCAA TTCCTTTGGG CAAAGCTCGT
CTGCCGATCG AGATCGCCCT CTGGAGCGTC ATCGCCACCA TCCTCGTCCT TCCCATGGCC
GGGCTTTTGG CCACATCCCT TGTGCCCGCC TACGGTGTGC CGTTGCGGCT GGATACGCTC
TCTTTCGAGG GCTGGCATGA GGCGCTGTTT CGCCAACCGG TCACCCAGCG CGCCTTTGTG
AACTCATTCG GACTCTCGCT AGGGGCAGCT GCGCTCTTGA TGGCGCTTTG CCTGCCGCTT
GCCTGGCTGA TGGAGCGTCA CAAAACCCGG CTTGGTCGCG TCTTTGACAG CCTTCTGGAC
CTGCCCTACG CGCTGCCCGG AGTTGTACTC GCGATTGCGA TGATCCTGCT GCTGATCAAC
CTGCCCTTCA CCGACGTCAC GCTCTACGGC ACCATCTGGA TCATCTTTAT CGCGTATCTC
GCGCGGTTCT TTGCAGTGAT GTTTCGCCCG GTGCAATCAA GCCTGCGTCA GCTGGACCCC
GCGATGGACG AGGCCGCACA AGCGGTGGGC GCGCCGTTGT GGCGTCGGCT GCGTGACATC
ATCCTGCCGC TCTCTGCCCC TTCGGCCGCG GCTGGCGCGA TCCTTGTGTT CCTGACCGCA
TTCAACGAGC TCACCGTATC CGCGCTTTTG TGGTCCTCAG GAACAGAGAC GCTTGGCGTA
GTGATCTTCA ACCTCGACGA CAGCGGCGAG ACGGTGATGG CCTCCGCCGT CGCCATGACC
ATCGTCTTTG TCGTCATGAT CCTGATGGCG GTGATCCAAG CCACATCCCG CCACCTGCCC
AAAGGAGTTG TGCCATGGCA GAGCTGA
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| Protein sequence | MSSLAAYSSS SRSEGRLLSL ILVLAVVLTL APVVRLFVEG LTAGDQLNFG FFAEVLQKPA
TLSALKHSLV TAGLGTALSL LIGGCFAFLV ALTDLRRKGA LVFCLMIPMM IPPQITALSW
TQIMGPSSVF LKTLGLAPPL GAPQPLYSPA GIILLLGIQH TSIIFLTLRA GLRAIPQDVV
EAARVSGAKG FRIWAQVVLP LTLPSLLAGV AITFVTALGN FGIPAMLGIP AGYATLPTLI
YQRLAGMGTT VLAEVAVLAT LIGVVAIAGI LLQRFCQSRQ RVHLVGGSGR ALSIPLGKAR
LPIEIALWSV IATILVLPMA GLLATSLVPA YGVPLRLDTL SFEGWHEALF RQPVTQRAFV
NSFGLSLGAA ALLMALCLPL AWLMERHKTR LGRVFDSLLD LPYALPGVVL AIAMILLLIN
LPFTDVTLYG TIWIIFIAYL ARFFAVMFRP VQSSLRQLDP AMDEAAQAVG APLWRRLRDI
ILPLSAPSAA AGAILVFLTA FNELTVSALL WSSGTETLGV VIFNLDDSGE TVMASAVAMT
IVFVVMILMA VIQATSRHLP KGVVPWQS
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