| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0542 |
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| Symbol | |
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| ID | 4077189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 574699 |
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| End bp | 575739 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005839 |
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| Product | ABC transporter related |
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| Protein accession | YP_612537 |
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| Protein GI | 99080383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.999499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGC TGACCCTGTC CGACATCACC AAACACTTTG GCGACGCGCC TGCTTTGCGC
TCCATCTCGA CCACTGTGCG CGATGGAGAG TTCCTCGCCC TTCTGGGTCC TTCGGGCTGC
GGGAAGTCCA CGCTTTTGCG ACTGCTGGCC GGATTCGAGA CCCCCAGCGA GGGGCGCATT
TCCATTGGAA CGCGCGAGGT CGCCAATGCA GAAAGACGCC TGAACCTGCC GCCCGAAGAA
CGCAACATCG GCTTTGTGTT CCAGTCCTAT GCGCTCTGGC CGCATATGAA CGTGCGGCGC
AATGTGGGCT ATCCGCTGGA AATCCGCCGC CTGCCCCGGG CAGAGCAAGA CGCCCGGATT
GATGCGGCGC TGCAGGCGAC CGCCCTTGAA CCCTATGGCG CGCGGATGCC CGCGGAGCTT
TCGGGTGGGC AACGGCAGCG GGTGGCGCTT GCGCGCTGTC TGGTCTCTGA TCCTACGGCG
GTTTTGCTGG ATGAGCCGCT CGCAAATCTG GACGTGGCCT TGCGCGCGTC GATGCAACAG
GTCTTTAGCG ACTTTCACCA GCGCACTCAG GCCACCATGG TCTATGTCAC TCACGACCAG
GCCGAGGCGA TGGCCATGGC GGATCGCATC GCGGTCATGA ACCAGGGTGA GATCGTACAA
CTCGACACGC CCGAGGCCCT TTATGCCCGC CCCCGCAGCC GCTTTGTCGC CGAATTCGTG
GGCGAAGGCG CTGTGGTGCC CCTGATCGGC GCGACCCATC ACGACAGAGG CGCAGAGGCG
ACCTTGCTCG GGGCGCGCTA CCCCATTGAA ACCGACACTC AAACCCCGGC GCTTGCCTGC
CTCAGACCTG AAAACCTGCA GATTTCGGAC GCCGGCAACA TTCGCGCGCG GGTGGAGCGG
GTGACGTATC TCGGGGGACG CTACCGGCTC GAACTGACCG CCGCGAGTGG CGACAGCCTG
GTAACCCAAT CCGCAACCCG CTTTGCCCTA GGCGAACAGA TCGGCCTGAC CCTATCCGCC
CCATGGGCCT TTGCCGCCTA G
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| Protein sequence | MAELTLSDIT KHFGDAPALR SISTTVRDGE FLALLGPSGC GKSTLLRLLA GFETPSEGRI
SIGTREVANA ERRLNLPPEE RNIGFVFQSY ALWPHMNVRR NVGYPLEIRR LPRAEQDARI
DAALQATALE PYGARMPAEL SGGQRQRVAL ARCLVSDPTA VLLDEPLANL DVALRASMQQ
VFSDFHQRTQ ATMVYVTHDQ AEAMAMADRI AVMNQGEIVQ LDTPEALYAR PRSRFVAEFV
GEGAVVPLIG ATHHDRGAEA TLLGARYPIE TDTQTPALAC LRPENLQISD AGNIRARVER
VTYLGGRYRL ELTAASGDSL VTQSATRFAL GEQIGLTLSA PWAFAA
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