Gene TM1040_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0540 
Symbol 
ID4077187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp573038 
End bp573619 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content64% 
IMG OID638005837 
Productphosphoglycerate mutase 
Protein accessionYP_612535 
Protein GI99080381 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.803779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCAT TTCCTGCCCT GCCCGCCCGC AGCTTCTGTC TGATCCGACA TGGTGAGACG 
ACCGCAAACC GCGATGAAAT CATCGCGGGG CGGCTCGATG TCGCGCTGAC GGATCTGGGG
CGGCAACAGG CGAGCCTGCT CAAAGAGATC TCCTTCCCGG AGCCCATCAC GCTGTTTTGC
AGCCCGATGG ATCGCGCAAT CAAGACCGCC TCGCTTGGGT TCCACGACAC CACCGCCCAG
GTGGTTCCAG ACCTGCGAGA ACGAGATTGG GGGGTATTTG AAGGGCGCCC CCTCTCGGAG
CTGCCGCCCC GGGACAGCAC ACCGCCCCAA GGCGAGGGGT GGCGCGACAT GATCCTGCGG
GTGCACGCCG CCATAACCTG GTGTTGCACG CAGTCTCAGG GCGCATTGCC GGTGCTGGTC
TGCCATTCCG GCGTGATCCG CGCAACACGC CTTCTCGCGC AACAAACCGG CGTCGGCACA
CGCCCCGCCA ATGCCACGCC CATCCTGTTT GAACACCACT CAGGCAAGCA TATCGAACAA
TGGCCGGATC ATTCTGGCGC CAACACAGCT CGACTGCGGT AG
 
Protein sequence
MASFPALPAR SFCLIRHGET TANRDEIIAG RLDVALTDLG RQQASLLKEI SFPEPITLFC 
SPMDRAIKTA SLGFHDTTAQ VVPDLRERDW GVFEGRPLSE LPPRDSTPPQ GEGWRDMILR
VHAAITWCCT QSQGALPVLV CHSGVIRATR LLAQQTGVGT RPANATPILF EHHSGKHIEQ
WPDHSGANTA RLR