| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0536 |
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| Symbol | |
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| ID | 4077183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 567866 |
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| End bp | 568981 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005832 |
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| Product | alcohol dehydrogenase GroES-like protein |
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| Protein accession | YP_612531 |
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| Protein GI | 99080377 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1062] Zn-dependent alcohol dehydrogenases, class III |
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| TIGRFAM ID | [TIGR02818] S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.262053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA CCCGCGCCGC AGTGGCCCTC GAAGCAGGCA AGCCGCTTGA AATCATGGAG
GTGAACCTCG AAGGCCCCAA GGCGGGCGAG GTTCTCGTCG AGATCAAGGC CACTGGCCTC
TGCCACACCG ACGAATTCAC CCGTTCAGGC GATGATCCCG AAGGTATCTT TCCCGCCATT
CTCGGCCACG AGGGCGCAGG CGTTGTGATT GAGGTCGGCG AAGGCGTCAA AAGTCTGAAG
CCAGGCGATC ATGTGATCCC GCTCTATACG CCCGAATGCC GCGAGTGCGA TTACTGCCTC
AACCCAAAGA CCAACCTCTG CCAGGCGATC CGTTCGACGC AGGGTCAGGG TCTTCTGCCC
GATGGCACGA CCCGCTTTTC GCTACCGGAC GGGACGCCGA TCCATCACTA CATGGGCTGC
TCGACTTTCG CCAACCACAC GGTTGTGCCC GAGATCGCGC TCGCCAAGAT CCGTGAGGAC
GCGCCCTTTG ACAAAGTGTG CTACATCGGT TGCGGCGTCA CGACGGGCAT CGGTGCTGTG
ATCAACACGG CCAAGGTCGA AATCGGGTCG ACTGCGATCG TGTTTGGCCT TGGCGGGATT
GGTCTCAACG TTATTCAGGG CCTTCGCTTG GCCGGTGCGG ACCAGATCGT CGGTGTGGAC
CTCAACCCCG GCAAGGTTGC GATGGCGGAA AAATTCGGCA TGACCGATTT TGTAAACCCC
TCCGAAGTCG AGGGTGATCT GGTGGCGCAC CTTGTTGAGC TCACGGGCGG CGGTGCGGAT
TACACCTTTG ACGCCACCGG GAATGTCAGC GTCATGCGCA CTGCACTCGA AGCGGCCCAC
AAAGGCTGGG GCGAGAGCAT CATCATCGGC GTGGCTCCGG CGGGCGCAGA GATTTCCACC
CGCCCCTTCC AGCTTGTGAC CGGCCGTTCC TGGCGCGGCA CCGCCTTTGG CGGCGCGTCC
GGTCGCACAG ATGTGCCAAA GATCGTGGAC TGGTACATGG ACGGCAAGAT CGAGATCGAT
CCGATGATCA CCCACAAACT GACGCTTGAT CAGATCAACG AAGGGTTTGA CCTCATGCAC
GAGGGCAAAT CGATCCGAGC CGTTGTCGAG TTCTAA
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| Protein sequence | MIKTRAAVAL EAGKPLEIME VNLEGPKAGE VLVEIKATGL CHTDEFTRSG DDPEGIFPAI
LGHEGAGVVI EVGEGVKSLK PGDHVIPLYT PECRECDYCL NPKTNLCQAI RSTQGQGLLP
DGTTRFSLPD GTPIHHYMGC STFANHTVVP EIALAKIRED APFDKVCYIG CGVTTGIGAV
INTAKVEIGS TAIVFGLGGI GLNVIQGLRL AGADQIVGVD LNPGKVAMAE KFGMTDFVNP
SEVEGDLVAH LVELTGGGAD YTFDATGNVS VMRTALEAAH KGWGESIIIG VAPAGAEIST
RPFQLVTGRS WRGTAFGGAS GRTDVPKIVD WYMDGKIEID PMITHKLTLD QINEGFDLMH
EGKSIRAVVE F
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