| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0535 |
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| Symbol | |
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| ID | 4077182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 566278 |
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| End bp | 567795 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638005831 |
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| Product | SpoVR family protein |
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| Protein accession | YP_612530 |
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| Protein GI | 99080376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.468104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.689072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACTG CAAAAACCGC CACCGCCCCC CTGTTTGATG GGCCAGAGTG GACGTTTGAG
CTCTTGGAGA AGGCCCGCGA CGCGATTGAG AAAATCGCGC TGGGCGATCT GGGTCTGGAC
GTCTATCCCA ACCAGATCGA GATTATTTCG GCCGAGCAGA TGCTCGATGC GTATTCTTGT
GTGGGGCTGC CGCTGATGTA TCAGCACTGG TCCTTTGGGA AACACTTCGC CCGTGATGAG
GCGCTCTATC GCACCGGGCG TCAGGGGTTG GCCTATGAGA TCGTCATCAA CTCCAATCCC
TGCATCAGCT ATAATATGGA AGAGAACACC ATGGCGATGC AGACGCTGGT GATGGCGCAT
GCGGCGTTCG GGCATAACCA CTTCTTCAAG AACAACTATC TGTTCCAGCA ATGGACCGAT
GCGGATGGCA TTCAGGACTA TCTGGCCTTT GCCAAGAATT ACATCGCCGC CTGCGAAGAG
CGTTATGGCT TTGATGCGGT GGAGGAAATT CTGGATGCAG CGCACGCGCT ACAAAGCCAG
GGTGTCTTTC GCTATGGCCG CCCGCCCAAG CCCACAATCG AGGAACGCCG CGCGATGCAG
CAGTTGCGTG AAGCCTATGA AAAAGGCCAG AGCGCGCTGG ATATCTGGAC AGATGCAACA
CTGGGTCTGA AGCGGGATGC GGATGCGCCG GATGCGGATC TGGATCATTC AGAGCGACGC
AAGCGGATGA ACCTGCCGCA GGAGAATATT CTCTATTTCT TGGAAAAGCA CAGCCCTGTG
CTTGAACCCT GGCAAAGGGA GATCCTGCGC ATCGTGCGCA TGTTGGCGCA GTATTTTTAT
CCGCAGAAAC AGACCAAGGT GATGAACGAG GGCTGCGCAA CCTTCGTGCA TTACTACATT
ATCAACGAAC TCTACGAGCA GGGGCTGATT ACCCAGGGCG CGATGATGGA GATGATGCAC
AGCCACACAA ATGTGGTGAT GCAGCCCGAA TATGACGATC CGCGCTATTC TGGCATCAAC
CCTTATGCGC TGGGCTTTGC GATGATGCAG GACATCCGAC GGATTTGCGA GGAACCGACG
GAGGAGGATC GAGAATGGTT CCCGGATATC GCTGGGAGCA AGGATTGGCG CGGTGTCCTG
CGCAACGCAT GGGCCAATTA CCGCGATGAG AGCTTTATCC AGCAATATCT CTCGCCGCAT
CTGATCCGTA AGTTCAAGCT CTTTACGCTG ACGGATGATG AGAGCCACCC CAAACTGGTG
ATCAGCCAGA TCCATAACCG CGCGGGCTAC AAGGCGATCC GCCGCGATCT CGCGAAACAG
TATGATCTTG CCTATATCGA ACCGGATATC CAGGTGAGCG ATGCGGATCT CAAGGGGGAT
CGCACGCTGA AGCTCGTGCA TAAGGTGCGC GACAACGTGC ATCTGGCCGA AGCTGACCGG
GATGAGGTGC TCAAACACTT GCGCAGGCTA TGGGGGTATG ACGTGAAACT CGACGCGGTT
GCGGACGGAC CACAGTAA
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| Protein sequence | METAKTATAP LFDGPEWTFE LLEKARDAIE KIALGDLGLD VYPNQIEIIS AEQMLDAYSC
VGLPLMYQHW SFGKHFARDE ALYRTGRQGL AYEIVINSNP CISYNMEENT MAMQTLVMAH
AAFGHNHFFK NNYLFQQWTD ADGIQDYLAF AKNYIAACEE RYGFDAVEEI LDAAHALQSQ
GVFRYGRPPK PTIEERRAMQ QLREAYEKGQ SALDIWTDAT LGLKRDADAP DADLDHSERR
KRMNLPQENI LYFLEKHSPV LEPWQREILR IVRMLAQYFY PQKQTKVMNE GCATFVHYYI
INELYEQGLI TQGAMMEMMH SHTNVVMQPE YDDPRYSGIN PYALGFAMMQ DIRRICEEPT
EEDREWFPDI AGSKDWRGVL RNAWANYRDE SFIQQYLSPH LIRKFKLFTL TDDESHPKLV
ISQIHNRAGY KAIRRDLAKQ YDLAYIEPDI QVSDADLKGD RTLKLVHKVR DNVHLAEADR
DEVLKHLRRL WGYDVKLDAV ADGPQ
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