| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0532 |
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| Symbol | |
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| ID | 4077179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 563004 |
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| End bp | 564938 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638005828 |
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| Product | putative serine protein kinase, PrkA |
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| Protein accession | YP_612527 |
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| Protein GI | 99080373 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2766] Putative Ser protein kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.374476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG TTGCAGAGCT TTTTGCAGAG GCCTATGGCC AGACGCGCGA GCAGGAAATG
TCTTTGCAGG ACTATCTCAT GGCCTGTCGC GATGACCCAA GCATGTATGC AAATGTTGCA
GAACGGATGC TGAAGGCCAT TGGTGACGAG GAACTCGTAG ATACATCGAA GGACGCCCGA
CTGGGGCCGA TTTTCCAGAA CCGGACCATC AAGCGATACT CCGCCTTCAA GGATTTCTAT
GGCATGGAGG ACACGGTCGA GCGGATCGTG GGATATTTTC GCCATGCAGC GCAGGGCCTT
GAGGAGCGCA AACAGATCCT CTACCTGCTC GGACCGGTGG GCGGTGGCAA GTCATCGCTT
GCGGAACGGC TAAAGCGCAT TGTTGAGGAT GAACCGATCT ACGTCCTGAA GGCGGGCGAT
CAGATGTCGC CGATCTTTGA AAGCCCGCTG GGCCTGTTTG ACCCCGTGCG CATGGGCAAA
CTCCTTGAAG AAGAATACGG GATCGCCACC CATCGTCTGC CGGGCCTGAT GTCACCCTGG
GCCGTGCAGC GCCTTGATGA GTTCGAAGGC GACATCAACA AGTTTACCGT TGTGAAACTC
CACCCCTCCC GCCTGCGTCG CATCTGTGTC GCCAAGGTCG AGCCGGGGGA CGAGAACAAT
CAGGACATCT CCACCCTTGT CGGTAAGGTC GATATTCGCC AGCTGGAGCA CTTTAGCCAA
GACAATCCAG ATGCCTACAG CTTTTCTGGT GGGCTGAACC GCGCCACGCA GGGTGTGCTT
GAATTCGTCG AGATGTTCAA AGCGCCGATC AAGATGCTGC ACCCGCTGCT AACCGCGACG
CAGGAAGGCA ACTATATGGG GACGGAGAGC TTTGGCGCGA TCCCATTCAA TGGCCTGATC
CTAGCGCACT CGAACGAAAG CGAATGGCAG ACGTTCAAGA ACAACAAAAA CAATGAGGCC
TTTATCGACC GGGTGTCGAT CGTGAAGGTG CCTTACTGTC TGCGGGTCTC GGACGAGGCG
CAAATCTACG AAAAACTGAT CCAGAATTCC GAGCTGCGCG AGGCACCCTG CGCGCCGGAA
ACCCTCAAGA TCCTCAGCCG TTTCTCGGTG CTGACGCGTC TGAAGCCGCA TGAAAACTCC
AACCTTTACA GTAAGATGCG GGTCTATGAC GGCGAAAGCC TGAAGGACAC CGACCCCAAG
GCCAAGACGG TGCAGGAATA TCAGGACCGC GCTGGTGTTG ATGAGGGTAT GAACGGTGTC
TCCACCCGCT TTGCCTTCAA GGTTCTCTCG TCGGTGTTCA ACCACGACAC GCAAGAGGTC
GCCGCCGATC CGGTGCATCT GATGTATGTG CTCGAAGGGA TGATCAAACG CGAGCAGTTC
CCCCAGGAGA CCGAGCAGAA ATACCTGGAG TTCATCAAGA CCGAACTGGC CCCCCGCTAT
GAAGAATTCA TCGGCAACGA AATCCAGAAA GCCTATCTCG AGAGCTATAC GGAATACGGC
CAGAACGTCT TTGATCGCTA TATCTCTTAT GCGGATGCAT GGATCGAGGA GCAGGACTAC
AAGGATCCTG ACACCGGTCA GCTTTATGAT CGTGAGGTGC TGGACGCGGA GCTCTCCAAG
ATCGAAAAGC CTGTGGGGAT CGCAAATCCC AAGGACTTCC GCAATGAGGT CGTGAAATTC
GCCCTGCGTC ATCGCGCCAA CACCGGGTCA AATCCGGCAT GGAACTCCTA CGAGAAACTG
CGGGATGTGA TCGAGAAACA TATGTTCTCT CAAGTCGAAG AGCTGCTGCC GGTGATCTCT
TTTGGCTCCA AGAAAGACAG CAAGACCGAG AGCAAACACC AAGAGTTCGT CGAGCGCATG
CGCGCCCATG GCTACACCGA CAGGCAGGTC CGACGCCTTG TCGAGTGGTA CATGCGGGTG
AACAAGGCGG GCTAA
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| Protein sequence | MNKVAELFAE AYGQTREQEM SLQDYLMACR DDPSMYANVA ERMLKAIGDE ELVDTSKDAR
LGPIFQNRTI KRYSAFKDFY GMEDTVERIV GYFRHAAQGL EERKQILYLL GPVGGGKSSL
AERLKRIVED EPIYVLKAGD QMSPIFESPL GLFDPVRMGK LLEEEYGIAT HRLPGLMSPW
AVQRLDEFEG DINKFTVVKL HPSRLRRICV AKVEPGDENN QDISTLVGKV DIRQLEHFSQ
DNPDAYSFSG GLNRATQGVL EFVEMFKAPI KMLHPLLTAT QEGNYMGTES FGAIPFNGLI
LAHSNESEWQ TFKNNKNNEA FIDRVSIVKV PYCLRVSDEA QIYEKLIQNS ELREAPCAPE
TLKILSRFSV LTRLKPHENS NLYSKMRVYD GESLKDTDPK AKTVQEYQDR AGVDEGMNGV
STRFAFKVLS SVFNHDTQEV AADPVHLMYV LEGMIKREQF PQETEQKYLE FIKTELAPRY
EEFIGNEIQK AYLESYTEYG QNVFDRYISY ADAWIEEQDY KDPDTGQLYD REVLDAELSK
IEKPVGIANP KDFRNEVVKF ALRHRANTGS NPAWNSYEKL RDVIEKHMFS QVEELLPVIS
FGSKKDSKTE SKHQEFVERM RAHGYTDRQV RRLVEWYMRV NKAG
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