| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0527 |
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| Symbol | |
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| ID | 4077233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 553735 |
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| End bp | 554442 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005823 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap |
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| Protein accession | YP_612522 |
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| Protein GI | 99080368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.265786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAG TGCTTGCGAT TATCGCGGCT TGCTTATCCT TAGGCCTTGC CGAAACAGCG
ACTGCTAAAG ATGGACGTGC CAGCAGCCTT CCGGGGTGGG AAGCGGTTGG TAGATTGAAT
ATTGCTGGCA AGTATATGTG CACCGGCACG TTGATTGCAC CAAATCTGGT ACTAACGGCG
GCGCATTGCG TGTATGACGC TCGCACCGGC CAGCGGGTGA ACCCGCGCGG TATCCGTTTT
GAAGCGGGGC TTGATGGGCG CCGGGTCAAA GCGCAGCGTT CTGTGTCAAA AGCAGTGGTG
CATCCGGCCT ATGAATTCCG CACCGGCGGA AACTCGCAGC TCGGTGCCGA TCTTGCGGTT
CTGCGTCTGT CTCAGCCGAT CAACCGCTCT GACATCCGCC CCTTTGCGAT GTCGGCCTCC
GCCAATCAGG GCGCCAGCGT GGATGTGCTC TCTTATAGCT ATCACAACGC CACCCGCGCC
AGCCGCGAAC AGGATTGTCA GGTGCTGTCG CGGCGGACCC GGACCCTCGT GATGTCGTGC
AGAGTGGATT TTGGGGCCTC GGGTGCTCCG GTTCTGGAAA TCACGCCCGG CCAGCCGCCC
AAGATCGTCT CGGTGATCTC GTCCAAGGCT GCCATGGGGC GTCGCCCGGT CTCGATCGGA
ACGGCTCTGG ACCGGACCCT GCGGGCGATG ATGCAAAACG CGATCTGA
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| Protein sequence | MRRVLAIIAA CLSLGLAETA TAKDGRASSL PGWEAVGRLN IAGKYMCTGT LIAPNLVLTA
AHCVYDARTG QRVNPRGIRF EAGLDGRRVK AQRSVSKAVV HPAYEFRTGG NSQLGADLAV
LRLSQPINRS DIRPFAMSAS ANQGASVDVL SYSYHNATRA SREQDCQVLS RRTRTLVMSC
RVDFGASGAP VLEITPGQPP KIVSVISSKA AMGRRPVSIG TALDRTLRAM MQNAI
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