| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0525 |
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| Symbol | |
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| ID | 4077231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 551302 |
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| End bp | 552300 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005821 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_612520 |
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| Protein GI | 99080366 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.170444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCT ACGCAGTAAA TGGCCTCGGC CGGATGGGCA AACTGGCCCT CAACCCCCTG
CTCGAGCGCG GCGCTCAGAT CGCCTGGATC AATGACGCGG TGGGCGATGC TGAAATGCAC
GCGCATCTTC TGGAGTTTGA CACGGTTCAT GGCCGCTGGG ACGCAGAATT CACATGCGAT
GCCGAAAGCA TCACCATCGA CGGCACCCGC CTGCCCGTTC TGAACAAGAC CAATCTTGCG
GATCTGCCGC TGGACGGCGT TGATGTCGTG ATCGACTGTA CCGGCGTTTT TAAGACCGAC
GCAAAGCTTG CACCTTACTT TGAGGCTGGC GTAAAAAAGG TCGTGGTCTC TGCCCCGGTC
AAGGACGGAG ATGCGGCGAA TATCGTGATG GGTGTCAATC ATGACATCTA TGACCCGTCC
CGCCATCGGA TTGTGACCGC GGCAAGCTGC ACCACTAACT GCCTCGCGCC CGTGGTCAAA
GTGCTGCACG AGGGGATCGG CATCAAACAC GGATCAATGA CAACGATCCA TGACGTAACC
AATACCCAGA CCATCGTGGA CCGCCCTGCC AAGGATCTGC GGCGCGCGCG CTCGGCGCTC
AACTCGCTGA TCCCGACCAC CACCGGCAGC GCCACGGCGA TCACGCTGAT CTACCCGGAG
CTAGAAGGGA AGCTGAACGG CCACGCCGTG CGGGTGCCGC TTCTCAATGC CTCACTCACG
GATTGCGTCT TTGAGGTCGC GCGCGACACC ACCGTTGAAG AGGTGAATGC CTTTTTCAAG
GAGGCTGCCA ATGGCGCACT CGACGGCATC CTTGGCTATG AGCTGCGCCC GCTGGTCTCG
GCCGATTACA CCAACGACAC GCGGTCCTCT ATTGTGGATG CGCCTTCGAC CATGGTCGTG
AACGGAACGC AGGTGAAGAT CTATGCGTGG TACGACAATG AGATGGGCTA TGCGCATCGT
CTGGTGGACG TGGCGATGAT GGTGGGTGAG AGCCTGTGA
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| Protein sequence | MTVYAVNGLG RMGKLALNPL LERGAQIAWI NDAVGDAEMH AHLLEFDTVH GRWDAEFTCD
AESITIDGTR LPVLNKTNLA DLPLDGVDVV IDCTGVFKTD AKLAPYFEAG VKKVVVSAPV
KDGDAANIVM GVNHDIYDPS RHRIVTAASC TTNCLAPVVK VLHEGIGIKH GSMTTIHDVT
NTQTIVDRPA KDLRRARSAL NSLIPTTTGS ATAITLIYPE LEGKLNGHAV RVPLLNASLT
DCVFEVARDT TVEEVNAFFK EAANGALDGI LGYELRPLVS ADYTNDTRSS IVDAPSTMVV
NGTQVKIYAW YDNEMGYAHR LVDVAMMVGE SL
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