| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0523 |
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| Symbol | |
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| ID | 4077229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 549000 |
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| End bp | 550034 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005819 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_612518 |
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| Protein GI | 99080364 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
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| TIGRFAM ID | [TIGR00832] arsenical-resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.27289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.171222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCT TCGAGAAATA CCTGAGCCTC TGGGTGGCAT TGGCGATGAC GGCCGGCATT
GCGCTTGGCA GTCTGGCCCC CGGCGTGATG GAGGCCATCG CCGCGCTGGA GGTGGCCCGT
GTCAATTTAG TGGTCGCGGC ACTGATCTGG GCCATGGTTT ACCCGATGAT GATTGGCGTG
AACCCACGAA GCCTACGAGA TGTGGCGCGC CAGCCCAAGG GCCTTGCGAT CACGCTGGTG
GTCAACTGGC TGATCAAACC CTTTACCATG GCCGCACTTG GCGTGCTGTT CTTCGAGGTG
GTCTTTGCGC CCTTTCTGGA GCCACAAGAC GCACAGCAGT ATATCGCGGG GCTGATCCTT
TTGGGGGCCG CGCCCTGCAC CGCGATGGTT TTTGTGTGGT CGCAACTCAC CCGGGGCGAC
GAAAGCTACA CCCTGCTGCA AGTCTCGGTG AACGATCTCA TCATGGTGGT GGCCTTTGCC
CCTATCGTGG CCTTTCTCTT GGGTGTCACG GACATTGAGG TGCCATGGAG CACGCTGATC
CTGTCGGCGG TGCTGTTTGT TGCTCTGCCG CTGATGGCCG GTCTCTGGAC CCGCAACCGT
TTGGCGGAAG AGGCGCGTAT CACGGCCTTT CTCGCACGGA TCAAACCGCT CTCGATGCTG
GGGCTGATCA CAACGGTGGT GATCCTGTTT GGCCTGCAAG GTCAGGTCAT TCTGGACCGC
CCGAGCGTGA TTGCGATGAT CGCCGTGCCC ATCCTGATCC AGAGCTACGG GATCTTCTTT
CTCGCCTATG GCGCCGCCTA TGCGCTGCGG GTGCCACATC GGATCGCAGC ACCCTGCGCG
CTGATCGGGA CGTCGAATTT CTTTGAACTG GCGGTGGCTG TCGCGATCAG CCTCTTTGGG
CTTCACTCCG GGGCGGCGCT CGCAACCGTG GTTGGCGTAC TGGTCGAGGT TCCAGTGATG
CTGACACTGG TGGCCTTTGC CAATCGCACC CGTGCCAGGT TTGCCTTGAC CGGAGCAGAC
CACCAGGCAA GCTGA
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| Protein sequence | MSIFEKYLSL WVALAMTAGI ALGSLAPGVM EAIAALEVAR VNLVVAALIW AMVYPMMIGV
NPRSLRDVAR QPKGLAITLV VNWLIKPFTM AALGVLFFEV VFAPFLEPQD AQQYIAGLIL
LGAAPCTAMV FVWSQLTRGD ESYTLLQVSV NDLIMVVAFA PIVAFLLGVT DIEVPWSTLI
LSAVLFVALP LMAGLWTRNR LAEEARITAF LARIKPLSML GLITTVVILF GLQGQVILDR
PSVIAMIAVP ILIQSYGIFF LAYGAAYALR VPHRIAAPCA LIGTSNFFEL AVAVAISLFG
LHSGAALATV VGVLVEVPVM LTLVAFANRT RARFALTGAD HQAS
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