Gene TM1040_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0522 
Symbol 
ID4077228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp548599 
End bp548973 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID638005818 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_612517 
Protein GI99080363 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.288111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.155331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGG TCACTGCAAG CTGCCTGTGC GGCGATATCC GCGTCAGAGC CTCCGGGTCC 
CCCATCGGTG TCGGCCTGTG TCACTGCATG GATTGTCGCA AGCACCATGG TGCGGTGTTC
TGGGCCGCGG CGGTTTACCC GGCTGAGGCG GTCGAAGTAT TCGGCCAGAC GCAACAATAT
CAGGGCCGCC ATTTTTGCCC GAGATGCGGA TCATCGGTCT ATTCATGCAG CGAAGGTGAG
GTGGAGCTCC ATCTCGGAGC AATGGATCAG CCAAACCAGT TCACGCCGAC CTATGAGCTA
TGGACAGACC GGCGCGAGCA CTGGCTCACC CCACTCGCCA GAGCCCATCA GCATTCTCGC
AATCGCGGGG CGTGA
 
Protein sequence
MSEVTASCLC GDIRVRASGS PIGVGLCHCM DCRKHHGAVF WAAAVYPAEA VEVFGQTQQY 
QGRHFCPRCG SSVYSCSEGE VELHLGAMDQ PNQFTPTYEL WTDRREHWLT PLARAHQHSR
NRGA