| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0519 |
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| Symbol | |
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| ID | 4077225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 545281 |
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| End bp | 547413 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005815 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_612514 |
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| Protein GI | 99080360 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.356261 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0658989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACG CAAGCGTAAC CGCCGATCTC GACTATCACG CGCTGAACGC GATGTTGAAC
CTCTATGACG ACGAGGGCAA CATCCAGTTC GACGCCGACC GTATGGCGGC CCGGCAGTAT
TTCCTGCAAC ACGTGAACCA GAACACCGTG TTCTTTCACT CGCTGGATGA AAAGCTCGGC
TACCTCGTCG AGAAAGGCTA TTACGAGCCG GAGGTGCTGG ATCAGTATTC CCGCAACTTC
CACCGCAAGA TCTGGGATGC GGCCTACGCC AAGAAGTTCC GCTTCCCGTC CTTCCTCGGG
GCGTTCAAAT ACTACACCTC CTACACGCTC AAGACCCGTG ACGGGCAGCG CTATCTCGAG
CGCTATGAAG ATCGTGTGGT GATGAACGCG CTGACGCTGG CACGCGGCGA TGAAAAGCTC
GCGATGAAGC TGATGTCGGA GATCATCGAC GGTCGTTTCC AGCCTGCTAC GCCAACCTTC
CTCAATGCCG GCAAAAAAGC CCGTGGCGAG TTTGTGTCCT GCTTCCTCTT GCGTCTCGAA
GACAACATGG AGTCGATCGG ACGCGGCATC AACTCGGCGC TGCAGCTCTC CAAACGCGGC
GGTGGCGTGG CCTTGATGCT GACCAACATT CGTGAACACG GCGCCCCGAT CAAGGGCATC
GAGAACCAGT CTTCGGGCGT CATCCCGGTG ATGAAGCTTC TTGAGGACAG CTTTTCCTAC
GCCAACCAGC TGGGCGCACG CCAGGGCGCG GGCGCGGTCT ATCTGAACGC GCATCACCCG
GATATTCTGC GTTTCTTGGA TACCAAGCGC GAAAACGCAG ATGAGAAAAT CCGCATCAAG
ACGCTCTCGC TTGGCGTGGT GATCCCCGAC ATCACCTTCC AGCTCGCCAA GAAAAACGAG
GACATGTATC TGTTCTCGCC GCATGACGTG GAAAAGGTCT ACGGTCAGGC CTTCTCGGAA
ATCTCGGTCA CCGAGAAATA TCACGAGATG GTGGACAACC CGCAGATCCG CAAAAAGAAG
ATCAACGCGC GCGCGTTCTT CCAGACCATT GCCGAGATCC AGTTCGAGTC CGGCTACCCT
TACATCATGT TCGAGGACAC GGTGAATGCC GCAAACCCGA TTGCGGGCCG CATCGCGATG
TCGAACCTCT GCTCGGAGAT CCTGCAGGTC AACGAGCCGT CCAAATTCAA TGACGACCTG
TCCTATGAGC AGATGGGCAC GGATATTTCC TGCAACCTTG GCTCGATGAA CATCGCCCGT
GCGATGGACG GTGGCGATCT GGCAGGCACT GTGGGCACCG CGATCCGCGC GCTCAATGCA
GTGTCGGAAA TGTCGAGCAT CGACTCCGTA CCTTCCATCC GCAAGGGCAA CGAAGAAGGC
CACGCAATTG GTCTTGGTCA GATGAACCTG CATGGATACC TCGCCCGCGA GCGCATCCAT
TACGGCAGCG CAGAAGGTGT GGATTTCACC AATATCTACT TCTGCACGGT TCTGTATCAC
GCGATCAGCG CCTCGAACGC CTTGGCAAAG GAAAAGAAAT CCAAGTTCAA AGGGTTTGAA
GACTCGGCCT ATGCCGATGG CAGCTTCTTT GAGAAATATG TCGAGAAGGA CTGGCTGCCG
GAAACCGACC GGGTGAAAGA GCTGTTTGAG ACCGCAGGTG TCGAGATCCC CACCCGCAAG
GACTGGGAAG CGCTGCGCGA CAAGGTGATG AAGCACGGGC TTTATAACCG CAACCTTCAG
GCGGTGCCGC CCACCGGCTC GATCAGCTAT ATCAACTATG CCACCTCCTC GATCCATCCG
ATCACCGCAA AGATCGAGAT CCGCAAGGAA GGCAAGATCG GTCGCGTCTA CTATCCCGCG
CCCTATATGA CCAATGACAA CCTCGAATAT TACCGCGATG CCTATGAAAT CGGGCCTGAG
GCGATCATCG ACACATATGC GGCTGCGACA CAGCATGTGG ATCAGGGGCT TTCACTGACC
CTGTTCTTCC CGGCGGAAGC ATCGACCCGC GACATCAACC GCGCGCAGAT CTACGCGTGG
AAGAAGGGGA TCAAGACGAT CTACTACATC CGCCTGCGCC AGCAGGCCCT CGAAGGCACC
GAAGTCGAAG GCTGCGTGTC CTGTTCGCTG TAA
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| Protein sequence | MLDASVTADL DYHALNAMLN LYDDEGNIQF DADRMAARQY FLQHVNQNTV FFHSLDEKLG
YLVEKGYYEP EVLDQYSRNF HRKIWDAAYA KKFRFPSFLG AFKYYTSYTL KTRDGQRYLE
RYEDRVVMNA LTLARGDEKL AMKLMSEIID GRFQPATPTF LNAGKKARGE FVSCFLLRLE
DNMESIGRGI NSALQLSKRG GGVALMLTNI REHGAPIKGI ENQSSGVIPV MKLLEDSFSY
ANQLGARQGA GAVYLNAHHP DILRFLDTKR ENADEKIRIK TLSLGVVIPD ITFQLAKKNE
DMYLFSPHDV EKVYGQAFSE ISVTEKYHEM VDNPQIRKKK INARAFFQTI AEIQFESGYP
YIMFEDTVNA ANPIAGRIAM SNLCSEILQV NEPSKFNDDL SYEQMGTDIS CNLGSMNIAR
AMDGGDLAGT VGTAIRALNA VSEMSSIDSV PSIRKGNEEG HAIGLGQMNL HGYLARERIH
YGSAEGVDFT NIYFCTVLYH AISASNALAK EKKSKFKGFE DSAYADGSFF EKYVEKDWLP
ETDRVKELFE TAGVEIPTRK DWEALRDKVM KHGLYNRNLQ AVPPTGSISY INYATSSIHP
ITAKIEIRKE GKIGRVYYPA PYMTNDNLEY YRDAYEIGPE AIIDTYAAAT QHVDQGLSLT
LFFPAEASTR DINRAQIYAW KKGIKTIYYI RLRQQALEGT EVEGCVSCSL
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