| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0513 |
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| Symbol | |
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| ID | 4077219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 539153 |
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| End bp | 540061 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005809 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612508 |
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| Protein GI | 99080354 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.810346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.24806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC TTGAGACAAA GTTCCTGCGC GAGTTTCTCG CGGTGGCGCA TGAAGGTTCG
ATCCGGCGCG CGGCAGACCG GCTCAACGTG GTGCCTTCTG CAATTTCGCG CAAGATTGCC
GAGGCCGAGG CGCGGCTCGG GGTCACGCTG TTTGAACGCA GCTCCAAGGG GGTTGTCCTC
ACCGAGGCCG GGGAACTCTT GCGCGAGCAC GCGCAACACA TGCGGGACGA GCAGACCTAC
CTGCTGGATC AGATCGGCCA TTTTCGCGAC GGGCGCAGCC AGATCGTGCG TATTGCAACA
GGCGAGGGGT TTGCCGCTGA CCTGATGGGC AAGGGGCTGT TGGGGCTGAC GCGCGCGCAT
CCCGAGCTTC GGTTTATTGT CGACCACGCG GGCACGGATG AGATCCAGCG CAAGGTCATC
GAGGGTGAAA GCGACATCGG CATTGCCTAT AACCCCCTGA TCACAGACGC GACCCGATCA
CTGGCCCAAG CGCGGCAATC GCTCTGTGTG ATCGCCCCGA CGCACTCGCC TTTGGCCCAG
CGAAAGAGCG TGACCCTTGC CGAGGTGCTG GAGCATCCGG TGGCGATGCT CAATGCCGGC
TATGCCATCC GGCATCTGGT CGGGCAGGCA GCTGCGGACC GGGGGTTGGC GCTGCGGGTA
CAGGCGGAGA TGGCCTCGAT CCCGTTGCTG ATCCACTATG TCTGCGCGGG GGTCGGGATC
AGCTTTCTGC CGCGCTTTTG CGCCACCAGT CAGGCTGAAC GCGGCGATCT GGCGGTACTC
GACATCGAAG AATCCTCGCT GCAGCAGGTC AGCACCCATC TGATGGTGCG CGCGCGCCGA
CGCCTGCCAA AGTCGGTGGC ATTGGTGGCA CGATATCTCG CCGAGAATAT GCAGGCCTTT
CGCGACTGA
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| Protein sequence | MDALETKFLR EFLAVAHEGS IRRAADRLNV VPSAISRKIA EAEARLGVTL FERSSKGVVL
TEAGELLREH AQHMRDEQTY LLDQIGHFRD GRSQIVRIAT GEGFAADLMG KGLLGLTRAH
PELRFIVDHA GTDEIQRKVI EGESDIGIAY NPLITDATRS LAQARQSLCV IAPTHSPLAQ
RKSVTLAEVL EHPVAMLNAG YAIRHLVGQA AADRGLALRV QAEMASIPLL IHYVCAGVGI
SFLPRFCATS QAERGDLAVL DIEESSLQQV STHLMVRARR RLPKSVALVA RYLAENMQAF
RD
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