| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0509 |
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| Symbol | |
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| ID | 4078255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 535543 |
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| End bp | 536205 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005805 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_612504 |
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| Protein GI | 99080350 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.137799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGC TGCTGACGGG CAACCGGCCC ACTGCCGAAA ATACGGGGTC CGCGCATGAT
CGCGTCTACC GCGCCTTGCG GACCCGGATC ATGCATGGGG CGATTGCGCC CGGAGCATCG
CTGACCCTGC GTGGAATCGG CAAGGAATAT GATGTCTCGA TGACCCCGGC GCGCGAGGCG
GTGCGCCGGC TGGTGGCCGA GGGCGCGTTG TTTCTCTCTT CTTCCGGTCG GGTCTCCACG
CCAGAGCTCT CCAATGAGCG GATCGAGGAG CTGGCAGCCC TTCGGGCGCT GATCGAGGTG
GAACTTGCCT CGCGGGCGCT GCCACGGGCG CATATGGCGC TGATCGACCG GCTGCAGGCG
ATCAATGGGA CCGTCGCAGA GATGATCTCT AAACGTGATG CGGTGGGCTA TATTCGCACC
AATCTCGAAT TTCATCGCAC GCTCTATCTG CGTGCGCAGG CGCCAGCGAT GCTGGCCATG
GCCGAAACAG TCTGGCTGCA ACTGGGGCCG ACCATGCGGG CGCTTTATGG TCGTCTGGGC
CGGACCGAAC CGCCGCAGAA CCACAAGCTG ATCATTGCCG CGCTCAAGGC GGGTGACGAG
CCGGGGCTAC GGCTCGCGTT GCGCACGGAT GTGACACAAG GGCTACGGCT TCTGGCGGGC
TAG
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| Protein sequence | MDKLLTGNRP TAENTGSAHD RVYRALRTRI MHGAIAPGAS LTLRGIGKEY DVSMTPAREA
VRRLVAEGAL FLSSSGRVST PELSNERIEE LAALRALIEV ELASRALPRA HMALIDRLQA
INGTVAEMIS KRDAVGYIRT NLEFHRTLYL RAQAPAMLAM AETVWLQLGP TMRALYGRLG
RTEPPQNHKL IIAALKAGDE PGLRLALRTD VTQGLRLLAG
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