| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0503 |
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| Symbol | hisS |
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| ID | 4078249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 530303 |
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| End bp | 531805 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005799 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_612498 |
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| Protein GI | 99080344 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.315875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG CCAAGAAACA GCCCCGTCCC AAGGCAATTA CGCCCAAAGG ATTCCGTGAC
TATTTCGGCG AAGAGGTGAC CCAGCGCACG CATATGCTGG CCACCATTGC GGAGGTCTAT
CATCATTACG GGTTTGAGGC GCTTGAGTCT TCTGCCGTTG AAACGGTCGA GGCTCTGGGC
AAGTTCCTCC CCGATGTGGA TCGCCCGAAT GAGGGCGTCT TTGCCTGGCA AGAGGCCGAG
GACGATGGCA AAGGTGACTG GATGGCGCTG CGCTATGATC TGACAGCGCC TCTGGCGCGG
GTTTATGCCC AGCACCGTAA CGATCTGCCA AGCCCCTATC GCCGCTATGC GATGGGGCCT
GTGTGGCGCA ACGAGAAGCC CGGCCCCGGT CGGTTCCGTC AGTTCTATCA ATGCGATGCG
GATACCGTTG GCACCGCGTC GATGGCAGCA GATGCCGAGA TCTGCATGAT GCTCTCGGAT
ACGCTGGAAA AGGTCGGCAT CCCGCGTGGC GACTATCTGG TGCGCGTCAA CAACCGCAAG
GTTCTGAACG GTGTTCTCGA GGCGATGGGC CTGCTCGAGG ACGACCCCAA GCGCGACGAC
GTCCTGCGCA CCATCGACAA GTTCGACAAG GTCGGCGAAA GCGGCGTGCG TGAGCTTCTG
GGTAAAGGGC GGCTTGACGC CTCTGGAGCC TATATCGACG GCGTGGGCCT TGAAGATCAT
CAGGCCGAGC CGGTTTTGGC GTTCCTGACT TCGAAGGGCG ACACCGTTAC CGAGACCATG
ACCAACCTGC GGGCTGCCGT AGGGGACAGC AAGGTCGGCC AGGAGGGCAT CGCCGAGCTG
GAGCTGATGG GGTCGCTCTT TGCCGCTGCG GGCTATGGTG AAGACCGCAT CCTGATCGAC
CCGTCGATTG TGCGTGGCCT TGGCTACTAC ACCGGTCCGG TATTTGAGGC GGAGCTGACC
TTTGAAATCT TTGACGAAAA AGGCCGTAAG CGCCAGTTCG GCTCGGTTGC AGGCGGTGGG
CGCTATGACG GTTTGGTGAA ACGTTTCACC GGCCAAGAAG TCCCTGCCGT GGGGCTCTCG
ATTGGCGTGG ACCGCCTGTT GGCGGCGCTG CGCGAAAAGG GCCGTTTGGC CGCGACCCCG
ACGGGGCCGG TTGTGGTCAC GGTGATGGAT CGTGATCGCA TGGCGGACTA CCAGGCGATG
GTGGCTGAGC TGCGTCAGGC GGGCATTCGC GCCGAGGTCT ATCTCGGCAA TCCCAAGAAC
TTTGGCAATC AGTTGAAATA CGCCGACAAG CGCCATTCGC CGATTGCGGT CATCGAAGGG
GGTGACGAAA AGGATCGTGG CGTGGTCCAG ATCAAGGACC TGATCCTCGG CGCCAAGATC
GCAGAAAGCG CCACCTTGGA AGAGTGGAAG GAACGCCCCA GCCAGTTTGA AGTGCCCCGC
ACGGAACTGG TTGCCAAGGT GCGTGAGATC CTCGTCAGCC AATCCAGCGA TCGGGAGGGC
TGA
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| Protein sequence | MAKAKKQPRP KAITPKGFRD YFGEEVTQRT HMLATIAEVY HHYGFEALES SAVETVEALG
KFLPDVDRPN EGVFAWQEAE DDGKGDWMAL RYDLTAPLAR VYAQHRNDLP SPYRRYAMGP
VWRNEKPGPG RFRQFYQCDA DTVGTASMAA DAEICMMLSD TLEKVGIPRG DYLVRVNNRK
VLNGVLEAMG LLEDDPKRDD VLRTIDKFDK VGESGVRELL GKGRLDASGA YIDGVGLEDH
QAEPVLAFLT SKGDTVTETM TNLRAAVGDS KVGQEGIAEL ELMGSLFAAA GYGEDRILID
PSIVRGLGYY TGPVFEAELT FEIFDEKGRK RQFGSVAGGG RYDGLVKRFT GQEVPAVGLS
IGVDRLLAAL REKGRLAATP TGPVVVTVMD RDRMADYQAM VAELRQAGIR AEVYLGNPKN
FGNQLKYADK RHSPIAVIEG GDEKDRGVVQ IKDLILGAKI AESATLEEWK ERPSQFEVPR
TELVAKVREI LVSQSSDREG
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