| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0495 |
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| Symbol | |
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| ID | 4078241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 517706 |
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| End bp | 518788 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005791 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_612490 |
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| Protein GI | 99080336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0472757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGC TAGAGAAACG ACCGCAGCCA TCGCGGGTGT GGTCCATGGC GACACCGCTG
CTGGCGGTGC TTGCGACAAT GGTGATGGGA GGGCTGTTGT TCGCGACCCT CGGCAAAAAC
CCCGTCGAGG CAATCCGAAC GATCTTTTGG GAGCCACTGT TTGGCGAGTT CGCCTTTTAT
TATCGCCCGC AGCTTCTGGT TAAGGGCGCT CCGCTGGTTC TGATCGCAAT CGGACTGAGC
CTTGGGTTTC GTGCGGGGAT CTGGAACATT GGCGCCGAAG GGCAATACAT CATCGGTGCT
TTGACCGGCG CAGGTGTGGG GTTGGCGTTC TATCCCACGG ACTCCTGGGT GATCTTTCCG
CTGATGGTTC TGGCGGGTGC CTTAGGGGGC TGGGCCTGGG CGATGATTCC AGCGGTGCTC
AAAACCCGTT TTGGCACCAA TGAAATCCTC GTATCCTTGA TGCTGGTCTA TGTGGCCGAG
CAGTTGCTTG CATCCATGTC GCTGGGGTTG ATGAAAAACC CCGAAGGCTT TGGCTTTCCG
GGATCGCGCA ACCTGCAACA ATACGAGAGC GCCCACAACG CTGAACTGAT TGCCGGAACC
GGCATGCACT GGGGTGTTGT CGCGGCGATG ATTGCGGTGA TTTTCTCCTA CGTGCTGCTG
AACCGGCATA TGCTCGGATA TCACATCCGC CTGACCGGCG AAGCACCGCG GGCGGCCCGG
TTTGCAGGCG TTAAACCCGC CCGGCTGGTT CTGTTTTGCC TTGGGATGTC TGGCGCTCTG
GCAGGGCTTG CAGGCATGTT CGAGGTCTCT GGGCCTTCGG GCCAGGTCTC CATCGATTTC
AACGTGGGCT ACGGGTTTAC CGCGATCATC GTGGCCTTTC TGGGGCGCCT GCATCCGGTG
GGTATCCTGC TGGCAGGCGC CTTGATGGCG TTGACATACA TTGGCGGCGA CATTGCGCAG
GGCAATCTCG GCCTGCCTTC GTCGGCCATT CAGGTTTTTC AGGGCATGCT GTTGTTCTTC
TTGCTGGCGC TTGATCTGCT CACCAACTAC CGCATCGCAA TTGGCAAGCC GGAGGCGCTC
TGA
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| Protein sequence | MIRLEKRPQP SRVWSMATPL LAVLATMVMG GLLFATLGKN PVEAIRTIFW EPLFGEFAFY
YRPQLLVKGA PLVLIAIGLS LGFRAGIWNI GAEGQYIIGA LTGAGVGLAF YPTDSWVIFP
LMVLAGALGG WAWAMIPAVL KTRFGTNEIL VSLMLVYVAE QLLASMSLGL MKNPEGFGFP
GSRNLQQYES AHNAELIAGT GMHWGVVAAM IAVIFSYVLL NRHMLGYHIR LTGEAPRAAR
FAGVKPARLV LFCLGMSGAL AGLAGMFEVS GPSGQVSIDF NVGYGFTAII VAFLGRLHPV
GILLAGALMA LTYIGGDIAQ GNLGLPSSAI QVFQGMLLFF LLALDLLTNY RIAIGKPEAL
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