| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0494 |
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| Symbol | |
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| ID | 4078240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 516786 |
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| End bp | 517706 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005790 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_612489 |
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| Protein GI | 99080335 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0299784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0482055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTGT CTGCTATCAA TCCAGTCCTT CTCATCGCCT CTCTGATGGT GGCGGCGACC
CCGTTGCTGC TGGCCGCTAT CGGCGAGCTG GTGGTGGAGA AATCCGGCGT TCTGAACCTC
GGCGTTGAAG GTATGATGAT CGTCGGGGCT ATTGCCGGGT TTGCAACCGC GGTCGAGACG
GGCTCTCCGC TATTGGGATT TGTCGCCGCG GCCGCGGCCG GGGCGCTCTT GTCGCTATTG
TTCGTGATCA TGACCCAGGT GGCGCTGGCC AACCAGGTGG CCTCGGGTCT GGCGCTGACG
CTATTTGGGC TCGGCCTGTC CGCGCTCATG GGGCAGCGAT ACGTAGGCGT GAAACCTCCT
CAGATGGGGC GCGTGGACAT TCCTCTTCTC TCGGATCTGC CCGTGGTTGG CCGAATCCTA
TTTGGCCATG ATGTCGTGCT CTATTTCGGG ATTGCTCTCA CGGCTGCGGT TTGGGCAGTG
CTCAAATACT CCCGCGTTGG CCTCATCCTG CGCGCGGTGG GTGAAAACCA CGACGCGGCG
CATGCACTGG GCTATAAGGT GGTCAAGATC CGCACGCTTG CGATCCTATT TGGAGGTGCC
TGCGCGGGGC TTGGCGGGGC CTACATCAGC CTGATCCGCG TCCCGCAATG GACCGAGGGC
ATGACAGCCG GGATTGGCTG GATTGCATTG GCGCTGGTGG TCTTTGCCAG CTGGAAGCCA
TGGCGCGCGC TTTTGGGTGC CTATCTTTTT GGCGGTGTGA CCGTGGTGCA GCTTAATCTT
CAGGCGGCGG GCGTTGCTAT CCCGGTGGAA TATCTGGCAA TGTCGCCGTA TCTGATCACT
ATTCTGGTGC TCGTCATTCT TTCCGCCGAC AAGAGCAGCG CGCCAGCGTC GCTTGGCCGG
AGTTTTCACG CCTCCCGCTG A
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| Protein sequence | MDLSAINPVL LIASLMVAAT PLLLAAIGEL VVEKSGVLNL GVEGMMIVGA IAGFATAVET
GSPLLGFVAA AAAGALLSLL FVIMTQVALA NQVASGLALT LFGLGLSALM GQRYVGVKPP
QMGRVDIPLL SDLPVVGRIL FGHDVVLYFG IALTAAVWAV LKYSRVGLIL RAVGENHDAA
HALGYKVVKI RTLAILFGGA CAGLGGAYIS LIRVPQWTEG MTAGIGWIAL ALVVFASWKP
WRALLGAYLF GGVTVVQLNL QAAGVAIPVE YLAMSPYLIT ILVLVILSAD KSSAPASLGR
SFHASR
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