| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0483 |
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| Symbol | |
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| ID | 4078521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 505027 |
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| End bp | 506433 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005779 |
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| Product | FAD linked oxidase-like |
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| Protein accession | YP_612478 |
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| Protein GI | 99080324 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.44731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.101905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCAGG CCATCACATT GCCCCGTAAC GAAGGCGGTA TCAAAGCTGC AATCGCCGCG
CTGTCTGAGG CGTTTGGCGA TCGTCTGCAG ACCGGGCAGG CCCTTCGTGA GCAGCATGGG
CACACGACCA CCTGGATCGA CAACCAGGCG CCGGATGCAG TGGTCTTTCC AACATCCTCC
GAAGAGGTCT CTGGTATTGT CAAAATATGC GCCGAGTTTG GTGTGCCGAT TATCCCCTTC
GGAACGGGCA CCTCGTTGGA GGGGCATGTC AACGCCCCCG CTGGTGGCAT CTGCGTGGAT
ATGATGCGGA TGGATCAGAT CGTTGCGGTC CACGCGGAGG ATCTCGACGT GGTGGTGCAG
CCCGGAGTGA CCCGCGAGCA GCTCAACACG TATCTGCGCG ATCAGGGGCT TTTCTTCCCC
ATTGATCCCG GCGCAAACGC ATCACTGGGT GGCATGGTGG CAACGCGGGC TTCTGGCACC
AATGCTGTGC GCTATGGCAC CATGAAGGAC AATGTTCTGA GCCTTGAAGC GGTGATGGCA
GACGGCAGCA TCATCCGGAC CGCGTCTCGG GCCAAGAAGT CCTCGGCGGG GTATGACATG
ACCCGTCTTC TGGTTGGTTC TGAGGGGACT TTGGGGCTGA TCACCGAGAT CACCCTGAAG
CTGCAGGGCA TTCCCGAGGC AATCCGCTCG GCGCGCTGTT CGTTCCGTTC GGTGGATGAG
GCCTGTCAGG CTGTGATGAT GACCATTCAA TACGGCATCC CCGTCGCCCG CATCGAGCTT
TTGGATGAAA TGAGTGTGCG CGCCGCCAAT CAGCATTCCG GGCTGGATTT GCCTGAGGTG
CCGCTGTTGC TCCTTGAATT TCATGGCTCG GACGCCGGCG TCGTCGAGCA GTCGGATACC
TTTGCGCAAA TTGCAGAAGA GTTCGGCGGG TTTGACATTG CCGCGACATC GACGCCGGAA
GAACGCAACA AGCTCTGGCA GGCGCGTCAC GACATGTATT GGGCCAGCCT TGGGCTGCGC
CCCGGTGCCA AGGGGATCTC GACCGATGTC TGCGTGCCGA TTTCCAAACT CGCCGATTGC
GTCTCTGCGG CCCGCTCCAA GGCCGAAGAA ATGGGGCTGA TTGCGCCCAT CGTGGGACAT
GTGGGAGATG GCAATTTCCA TGCGCTTTTG CTGATCGATA TGGAGAGCGC AGAAGAGCGA
GAAAAGGCGG ATACCTATGT CAGCTGGCTC AACGATCTGG CGATTTCCAT GGAAGGCACC
TGCACCGGGG AACACGGCAT CGGTCAGGGC AAACGCCCCT ATCTGGTTCG TGAATTGGGG
GAGACCACCC GCTTTATGGC GGCGGTCAAG GCAGCGCTGG ACCCGGATAA TATCCTCAAC
CCGGGCAAGA TCCTGATTGA CGGCTAA
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| Protein sequence | MVQAITLPRN EGGIKAAIAA LSEAFGDRLQ TGQALREQHG HTTTWIDNQA PDAVVFPTSS
EEVSGIVKIC AEFGVPIIPF GTGTSLEGHV NAPAGGICVD MMRMDQIVAV HAEDLDVVVQ
PGVTREQLNT YLRDQGLFFP IDPGANASLG GMVATRASGT NAVRYGTMKD NVLSLEAVMA
DGSIIRTASR AKKSSAGYDM TRLLVGSEGT LGLITEITLK LQGIPEAIRS ARCSFRSVDE
ACQAVMMTIQ YGIPVARIEL LDEMSVRAAN QHSGLDLPEV PLLLLEFHGS DAGVVEQSDT
FAQIAEEFGG FDIAATSTPE ERNKLWQARH DMYWASLGLR PGAKGISTDV CVPISKLADC
VSAARSKAEE MGLIAPIVGH VGDGNFHALL LIDMESAEER EKADTYVSWL NDLAISMEGT
CTGEHGIGQG KRPYLVRELG ETTRFMAAVK AALDPDNILN PGKILIDG
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