Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0480 |
Symbol | |
ID | 4078518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 501938 |
End bp | 502924 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638005776 |
Product | glycolate reductase |
Protein accession | YP_612475 |
Protein GI | 99080321 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.330194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.55388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAGAG AACGCCTGAG TGTTGTTGTT ACGCGACGGT TGCCAGAGCC GGTGGAAACC CGCCTGAGCG AATTGTTCGA CGTGCGGTTG CGCACCGACG ACACCCCAAT GACCCGCACA GAGCTGGCCG CCGCCATGAA AGAGGCGGAT GTGCTGGTAC CGACGGTCAC CGACACGATT GACGCAGGCC TTCTGGGGCA GGCGGGCGAG CGGCTGCGGC TGATCGCCAA TTATGGCGCG GGTGTCGACA ATATCGACGT GGCCACTGCG CGCCAACGGG GCATTCTGGT CTCCAACACC CCCGGCGTGC TGACCGACGA CACGGCCGAT ATGACGATGG CGCTGATCAT GGCTGTCGTG CGCCGCATTC CCGAGGGTCT TGCGATCATG CAGCGCGGCG ATTGGGAGGG CTGGTCGCCC ACGGCCATGC TTGGCGGGCG TCTTGCAGGG CGCCGACTTG GCATTCTGGG CATGGGCCGC ATCGGTCAGG CCGTCGCACG CCGTGCCCGC GCTTTTGGCA TGCAGGTGCA TTACAACAAT CGCCGGCGCC TGCGTCCCGA GGTCGAGGAA GAGCTCGAAG CAACATGGTG GGAAAGCCTT GATCAGATGG TGGCCCGCAT GGATGTGATT TCGATCCACT GTCCCTCGAC GCCTTCGACC TTTCACTTGA TGAACGCGCG GCGCCTGAAG CTGCTGAAGC CCGATGCGGT GATCGTCAAC ACCTCGCGCG GGGAGGTGAT CGACGAAAAC GCTCTGACGC GCGGCCTGCG CGCGGGCGAA ATCGCGGGCT GTGGGCTTGA TGTCTACGAA CATGGTACCA CCGTTAATCC GCGCCTGCGC GAGCTGCCCA ATGTGGTGCT CCTGCCTCAT ATGGGGTCTG CTACGATCGA GGGGCGGATC GAAATGGGCG AGAAGGTTCT ATTGAATATC AAGACATTTG AAGATGGGCA TCGCCCACCG GATCAGGTGG TGCCTGCCAT GTTGTAA
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Protein sequence | MPRERLSVVV TRRLPEPVET RLSELFDVRL RTDDTPMTRT ELAAAMKEAD VLVPTVTDTI DAGLLGQAGE RLRLIANYGA GVDNIDVATA RQRGILVSNT PGVLTDDTAD MTMALIMAVV RRIPEGLAIM QRGDWEGWSP TAMLGGRLAG RRLGILGMGR IGQAVARRAR AFGMQVHYNN RRRLRPEVEE ELEATWWESL DQMVARMDVI SIHCPSTPST FHLMNARRLK LLKPDAVIVN TSRGEVIDEN ALTRGLRAGE IAGCGLDVYE HGTTVNPRLR ELPNVVLLPH MGSATIEGRI EMGEKVLLNI KTFEDGHRPP DQVVPAML
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