Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0479 |
Symbol | |
ID | 4078517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 501173 |
End bp | 501775 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638005775 |
Product | hypothetical protein |
Protein accession | YP_612474 |
Protein GI | 99080320 |
COG category | [S] Function unknown |
COG ID | [COG3807] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.539349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCATCG AGGCCGTGCA GACATTCACT GAACAAAATG AACGCCCGCG CAGCCGCTCT GTGCGAGTCG CCCTGCGCGG GGCGCTTTGT GCACTTGTGA TGGGTGGTTT CTTTGTCAGC ACGGCCCCCG TCGCCACCGC GCAGGAGAGC GCGCCCGAGA GAGCTGCCGC GCAAACTCTT GGGCCGGTCA CGAACCTGCC CCTGCCCCGC TACGTGTCCA TGAAAGCCGC CGAAGGCAAC GTGCGCCGTG GCCCGTCACT CAATCATCGT ATCGACTGGG TGTTCAAACG CCGCGGGATG CCATTGGAGG TCACGGCCGA ATATGGCCAC TGGCGACGCG TGCGTGACCG GGATGGACAA GGAGGCTGGG TTCATTACGC GCTTTTGTCG GGGGTGCGCA CGGTCTTGGT CGAACAGGAT CTTGTGCAAG TGCGCGCACG CCCTCAGGAG GACGCGCCGG CGGTGGCCGC GTTTGAGCTT GGGGTTGTGG CCCAGCTTGG CGCCTGCACG CGCGACTGGT GCGAAATCAC CGCCGGGGGA CACAGCGGCT GGACGCACAA AGACAATCTC TGGGGCGTTG ATCCGGACGA ACTGCGCGAG TAA
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Protein sequence | MGIEAVQTFT EQNERPRSRS VRVALRGALC ALVMGGFFVS TAPVATAQES APERAAAQTL GPVTNLPLPR YVSMKAAEGN VRRGPSLNHR IDWVFKRRGM PLEVTAEYGH WRRVRDRDGQ GGWVHYALLS GVRTVLVEQD LVQVRARPQE DAPAVAAFEL GVVAQLGACT RDWCEITAGG HSGWTHKDNL WGVDPDELRE
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