| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0468 |
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| Symbol | |
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| ID | 4078350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 486728 |
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| End bp | 487573 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638005764 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_612463 |
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| Protein GI | 99080309 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATACGA GATTCGTAGC GAGCTTGCTG GCCATAATCG AGGAGGGCTC GATCGCGGCT
GCGGCGCGGC GCAGCGGGGT GACGGCCTCG GCGCTGTCGC AGCGGATCTC TGCACTTGAG
GCTGAACTGG GCGTCACGCT TTTGCGGCGC GAGGGGCGAA TGGTGCAGCC CACGCATGCC
TGTCGCAGCG TGCTGCCCCG GCTGCGGGCG ATGCTTCGGC TGGAACAGGA CTTGCGCGCG
GACTTGCGGG GTCAGAGGCT GGCAGGGCCC TTGCGGGTGG GGGCGATCTC TACCGCGCTT
GGGGACTGGG CGGCGCAGCT TTTGCGGCAT CTGCATCACG CGGCTCCCGA TGTGGATCTG
CGGTTTGTTC CCGGGACCTC GCCGGGTTTG ATGGCTCTTC TGGAGGCAGA AGAAATCGAT
TTGGCGCTGG TGGTGGAGCC GCCTTTGTCG CTGCCAAAAT CCCTGCGGTT CCAGCAGATG
TTTCAAGAGC CCGTTGGGTT GTTACGCCCA GCTTTGGATA GCGCCAGCAC CTTGCCTTAT
CTGGTCTATT CGCGTGAAGC CTGGGGCGGG GCGATCTGTT GGTCGGCCTT GACTGCGCGC
GAGCCAAACC CGTCTGTCTT GGTGGAAATG GATGCGCTCG AAGCGCTGGC GCAGATGGTC
GAGGATGGTG TCGGTCAAGC GGTGCTGCCA GCGTGGCGCA GTCTGGCGCG CCATGCGCCC
GCAGCCCGGT TCACCGCGTG GCCTGGTGTT TATCGTAGCA TTGGCCTGCT GCACCGTCTG
CGCGATCAGG ACAGCCCGTT TCTGACATTG GTGCGCGAGG GGATCGGGCA GGAAGGCGGC
CCTTAG
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| Protein sequence | MDTRFVASLL AIIEEGSIAA AARRSGVTAS ALSQRISALE AELGVTLLRR EGRMVQPTHA
CRSVLPRLRA MLRLEQDLRA DLRGQRLAGP LRVGAISTAL GDWAAQLLRH LHHAAPDVDL
RFVPGTSPGL MALLEAEEID LALVVEPPLS LPKSLRFQQM FQEPVGLLRP ALDSASTLPY
LVYSREAWGG AICWSALTAR EPNPSVLVEM DALEALAQMV EDGVGQAVLP AWRSLARHAP
AARFTAWPGV YRSIGLLHRL RDQDSPFLTL VREGIGQEGG P
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