| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0466 |
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| Symbol | |
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| ID | 4078348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 485294 |
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| End bp | 486220 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005762 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_612461 |
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| Protein GI | 99080307 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAATG CGCTTTTTGC AGCCCGTCCG GAACGGTGGG ACACCTATGA GCCAACCCTG
CGCGCTGCGT TCGAGGCCGA GGGGCTCGCA GTCGATCTGC GCCAGGATTT CGCGCCCGAG
GACGTGGATT ACATAGTCTA TGCGCCCAAT TCAGACCTTC AGGACTTTCG CCCCTACACG
CGCTGCAAAG CGGTCCTGAA CCTCTGGGCC GGGGTGGAGA AGATCACCAC CAATGAGACC
CTGACCCAAC CGCTCTGCCG TATGGTCGAC CCTGGCCTGA CGCAATCCAT GATCGAATGG
GTCACGGGCC ATGTGCTACG GTATCATCTG GACATCGACC GCTCTCTCGC GCTGCAGAAC
AGCTGGTCGC CCTATATCCC GCCGCTTGCC GAAGAGCGCC CCATCACCAT TCTCGGCCTC
GGCGCTCTGG GCCAGGCCTG CGCCACGGCT TTGACGCAAC TCGGCTTTCC CGTCTCCGGA
TGGTCGCGCA CCGCCAAATC TGTTGCGGGC GTGACCTGTC ACCACGGACC AGAGGGCCTG
AATGCAGCGC TTGCGGAGGC GCAGATCGTT ATCCTGCTCT TGCCGGATAC GCCTCACACC
CAAAACATCC TGAATGCGCA AAGCCTCGCT CGGCTGCCCA AGGGCGCACG CATCATAAAC
CCCGGCCGCG GCCCCCTGAT CGACGACGAG GCCCTGCTTG CGGCGCTCGA AACGGGGCAG
ATCGCACATG CGACCTTGGA TGTGTTCCGG ATTGAGCCCC TGCCCGAGGA TCATCCCTAT
TGGGCCCATC CCAAAGTCAC TGTGACCCCT CACATCGCGG CTGAAACCCG CCCCATCACG
GCCTCACGCG TGATTGCGGA GAATATTCGC CGCGGCGAAG CAGGTGAGGA TTTTGTGCAT
CTCGTCGACC GGAACCGCGG CTATTGA
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| Protein sequence | MINALFAARP ERWDTYEPTL RAAFEAEGLA VDLRQDFAPE DVDYIVYAPN SDLQDFRPYT
RCKAVLNLWA GVEKITTNET LTQPLCRMVD PGLTQSMIEW VTGHVLRYHL DIDRSLALQN
SWSPYIPPLA EERPITILGL GALGQACATA LTQLGFPVSG WSRTAKSVAG VTCHHGPEGL
NAALAEAQIV ILLLPDTPHT QNILNAQSLA RLPKGARIIN PGRGPLIDDE ALLAALETGQ
IAHATLDVFR IEPLPEDHPY WAHPKVTVTP HIAAETRPIT ASRVIAENIR RGEAGEDFVH
LVDRNRGY
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