| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0453 |
|---|
| Symbol | |
|---|
| ID | 4078335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 471312 |
|---|
| End bp | 471992 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638005749 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_612448 |
|---|
| Protein GI | 99080294 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0978752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATACA CACTCTATAT TGCAGATCGC ATGTATTCCA GCTGGTCTTT GCGCGGCTGG
CTCATGCTCG AGAAGTTCTC CCTGCCCTAC GACACGCGGC TGGTGGGACT CTACAACGGA
ACCATGGCGC AGGACCTTGC CGAGGTTGCA CCGGCTCGAT TGGTGCCCAC GCTGGTCCTG
CCGGATGGCA CCGTGGTTGG CGAAACCATG GCCATGGCTG AGACCCTCGC CGAGCGTCAC
CCCGAAGCCG GGCTCTGGCC CGCATCAGAA GCCAGTCGGG CCACGGCGCG CTGGCTCTGC
GCAGAGATGG CGGCGGGGTT TGAGGCCTTG CGGTCGGCCT GCCCCATGCA GCTTGGTCAT
ATCTGGCAGG GATTTGAGCC TTCGGAGGCC GTTCTCAACG ATCTAAGCCG ACTGGAGAAA
CTCTTCGCCC ACGCGCGTGC GGTCTCTGGC CACGCACGGG GCCCTCTTTT TGGCGCTTAT
AGCCTTGCCG ATGTATTCTA CACCCCAGTT GCGGCACGGG TCATCGGATT TGACCTCCCG
GTCTCTACAG AAACCCGCGC CTACTGCGTG GAGCTTCTGA GCGATCCCGC GGTGCTTGCG
TGGCAGGCGG AAGCGCGCAA AGTCCACTAC GACCCGGAAC CCTATGCGCT GGATCTGGAG
CGCAAACCCT GGGCGCTGTG A
|
|---|
| Protein sequence | MTYTLYIADR MYSSWSLRGW LMLEKFSLPY DTRLVGLYNG TMAQDLAEVA PARLVPTLVL
PDGTVVGETM AMAETLAERH PEAGLWPASE ASRATARWLC AEMAAGFEAL RSACPMQLGH
IWQGFEPSEA VLNDLSRLEK LFAHARAVSG HARGPLFGAY SLADVFYTPV AARVIGFDLP
VSTETRAYCV ELLSDPAVLA WQAEARKVHY DPEPYALDLE RKPWAL
|
|---|
| |