| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0437 |
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| Symbol | |
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| ID | 4076080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 453126 |
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| End bp | 455156 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005733 |
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| Product | bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase |
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| Protein accession | YP_612432 |
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| Protein GI | 99080278 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases
[COG2030] Acyl dehydratase |
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| TIGRFAM ID | [TIGR02278] phenylacetic acid degradation protein paaN |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.68112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCCGA AAGATGTGGC GAGCTTTGCC GCCGGAGAAT GGATCGCACC GGACCACAGC
GCACGCGAGA TTGCCTCTGC CATCACCGGA GAGGTGATTG CGCGCGCGGG CAATGCCACG
CTCGATGTGC AAGCGATGCT CGATCATGCC CGCGATACGG GCGGCCCCGC CCTGCGCGCC
ATGACCTTCC ATGACCGCGC CCGCATGCTC AAGGCGCTGG CGCAGCATTT GGACGCCCAC
AAACAAGAGC TCTACGACCA GAGCTTTGAC ACCGGCGCGA CCCAGAAGGA CCACCTGATC
GACGTGGACG GCGGCATCGG CACGGTGTTT GTCTTTGCCT CCAAGGGGCG ACGCGAAATG
CCCGACAGCA CGGTCTATAC AGACGGCGCG GTCGAGCAAC TGTCGCGCCA CGGCAGCTTT
ATGGGCCAGC ACATCTGCAC CTCGCTGCCC GGTGTTGCGG TACATATCAA CGCCTTCAAC
TTCCCGGTCT GGGGCATGCT GGAAAAGCTC GCACCCACCC TGCTCGCCGG TGTTCCGGCC
ATTGTAAAAC CAGCCACCGC CACCTGCTAC GTCACCGAGG CCGCCGTGCG CCTAATGCTC
GACAGCGGTC TTCTGCCCGA AGGGGCGTTG CAACTGGTAA GTGGCGGACT TGGCGACATG
CTGGACCGGC TGACCTGTCA GGACGTGGTG AGCTTTACCG GCTCTGCCGC AACCGCGCTC
AAACTGCGCC AGACCCCCGC GATTGTTGAA AACTCCGTGC GGTTTGTAGC GGAACAAGAC
AGCCTCAACG CGTCGATCCT CGGCCCCGAC GCAGCACCCG GTAGCGCGGA GTTTGATCTC
TTCCTCAAGG AAGTACAGCG TGAGATGACC ACCAAAGCGG GTCAGAAGTG TACTGCGATC
CGCCGCATCA TCGTGCCCGA CGCACAGGTA AACGCTGTGA TCGATGGGCT GAGCGCCGCG
CTTGCCAAGA TCACCATTGG TGACCCACGC GCCGACAGCA CCCGTATGGG CGCGCTGGTC
TCCGCCGCGC AAAAACGCGA TGTGCTGGAG CAAGCCGACA AAATCGCAAC CGAGGCCACC
CGCGTCTTTG GCGACCCCGA CAATTTCACC GTTGAGGGCG CTGACAAAGA CAAAGGCGCC
TTCGTGCCGC CCATGCTGTT CCACTGTGCC GACCCGGACG CCGCGCGACA TGTGCACGAC
ACCGAAGCCT TTGGCCCTGT CTCTACCGTC ATGGGCTATC GCGACCTTTC TCATGCGTCC
GAACTCGCCA ATCGCGGCCA AGGCTCCCTC GTGGCGTCCC TGATCACCGC AGACCCGGTG
GTCGCACGCG AGGTCACGCT AAACATCGCG GCCTTCCATG GACGCGTCTA TATCAACAAT
GCCACCTCCA TGAAGGAATC CACGGGCCAC GGCTCTCCCC TGCCCCATAT GGTGCATGGC
GGCCCCGGTC GCGCCGGCGG CGGCGAGGAG CTGGGCGGCG TGCGTGCGGT GAAACACTAC
ATGCAGCGCA CTGCGGTACA GGGTTCGCCC GAGATTCTGT CGGCGATCAC CGGCAAATGG
GTGCCCGGCG GCCCCGAAAC CACAGGGCCC GCACATCCCT TCACGCGCCG CTTTGGCGCA
CTCACGATTG GGGAAACACT GCACACCGCG CCGCGTGTCG TCACCAGCGA TGACGTCGCC
CATTTTGCGC AGTTCACCGG CGACACCTTC TATGCCCACA TGGACGATGC CGCCGCAGAG
CGAAACCCGT TCTTTCCCGG CCGCGTTGCT CATGGCTACC TGCTCCTGTC CTTTGCAGCG
GGCATGTTCG TAGAGCCGAA TGAGGGCCCC GTGCTCGCCA ATACCGGACT TGATAACCTG
CGCTTCATGA AGCCGGTGGT GCCTGGCGAC AGCATCAAGG TGCGCCTGAC CGTCAAAGCC
AAGACCCCGC GAAACGAAGA ATATGGCGAG GTCCGCTGGC ATGTGACCCT CACCAATCAA
GATGATGAGC TGGTGGCGGA ATACGACCTG CTGACCATGG TGGCGTTCTG A
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| Protein sequence | MCPKDVASFA AGEWIAPDHS AREIASAITG EVIARAGNAT LDVQAMLDHA RDTGGPALRA
MTFHDRARML KALAQHLDAH KQELYDQSFD TGATQKDHLI DVDGGIGTVF VFASKGRREM
PDSTVYTDGA VEQLSRHGSF MGQHICTSLP GVAVHINAFN FPVWGMLEKL APTLLAGVPA
IVKPATATCY VTEAAVRLML DSGLLPEGAL QLVSGGLGDM LDRLTCQDVV SFTGSAATAL
KLRQTPAIVE NSVRFVAEQD SLNASILGPD AAPGSAEFDL FLKEVQREMT TKAGQKCTAI
RRIIVPDAQV NAVIDGLSAA LAKITIGDPR ADSTRMGALV SAAQKRDVLE QADKIATEAT
RVFGDPDNFT VEGADKDKGA FVPPMLFHCA DPDAARHVHD TEAFGPVSTV MGYRDLSHAS
ELANRGQGSL VASLITADPV VAREVTLNIA AFHGRVYINN ATSMKESTGH GSPLPHMVHG
GPGRAGGGEE LGGVRAVKHY MQRTAVQGSP EILSAITGKW VPGGPETTGP AHPFTRRFGA
LTIGETLHTA PRVVTSDDVA HFAQFTGDTF YAHMDDAAAE RNPFFPGRVA HGYLLLSFAA
GMFVEPNEGP VLANTGLDNL RFMKPVVPGD SIKVRLTVKA KTPRNEEYGE VRWHVTLTNQ
DDELVAEYDL LTMVAF
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