| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0436 |
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| Symbol | |
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| ID | 4076079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 452191 |
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| End bp | 453096 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005732 |
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| Product | PaaX-like |
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| Protein accession | YP_612431 |
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| Protein GI | 99080277 |
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| COG category | [K] Transcription |
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| COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.581976 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTG GGCTGGCGCT AACCCGCGCC AGCCCTTATC GTATCTGCAT GACACAACAC
ACCGACGACT GGTTTACCAC TGCAATCACG GCGCTCACTG AACCGGATGG CCTGAGGGTC
TGGTCCATCA TCGTGTCCTT CCTCGGAGAT ATGGCGCAAG ACAAAGGCGC CGGCGTCAGC
AGTGCTGCCT TGACGCGGGT TATTACTCCG CTTGGCATCA AACCAGAGGC CATTCGGGTT
GCGCTGCACC GTTTGCGTAA GGATGGCTGG ACCGAGAGCC AGCGACGCGG GCGGGGCTCC
TTTCATTTCC TGACTCCCTT TGGGCGGCAG CAATCCGCGT TGGTGACCCC CCGTATCTAC
GCGCGCAGCA CATGTGAAAC AGACGCCTGG ACCTTGCTTG TTGCGGGCAC GCCAGACGGG
CTGGAGACGC TGGATGCGCT CTGCGACCAG ACGCCACTAA CCAGCATCCG GGTCAATCGC
CACGCCGCGA TCACACCGGG CCCTGCCATG CAGCACGCCG CAGAGACCTC GCACATGCTG
GTTGCAAATC TCGATGTGGC GCATGTGCCC GGCTGGCTAC AGGACGATCT CTTTCCAGAA
CCATTGCGGC AGAGCTGCGC GGCTCTTGAC CAGGCCCTTG CGCCCCTCGG GAGCCCACCA
GACCTCTCTC CCTTGCAACG CGCCTGCCTG CGCACGCTCC TCGTCCATCG CTGGCGCCGG
ATTACGCTCC GACACCCGGA CGTGCCACGC ATATTTCACC CCGCAGATTG GAGCGGAGAA
TCCTGTCGCA CGCGGGTCTT TGCCCTGCTC GACAAGTTGC CGCAGCCCGA ACTGGCAGAA
ATCGAAGACG CTGCCCCTGT GGCCGTACAA GCTGCGCCCC AAGGCACAAT CGCCGTAACT
GGCTGA
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| Protein sequence | MAVGLALTRA SPYRICMTQH TDDWFTTAIT ALTEPDGLRV WSIIVSFLGD MAQDKGAGVS
SAALTRVITP LGIKPEAIRV ALHRLRKDGW TESQRRGRGS FHFLTPFGRQ QSALVTPRIY
ARSTCETDAW TLLVAGTPDG LETLDALCDQ TPLTSIRVNR HAAITPGPAM QHAAETSHML
VANLDVAHVP GWLQDDLFPE PLRQSCAALD QALAPLGSPP DLSPLQRACL RTLLVHRWRR
ITLRHPDVPR IFHPADWSGE SCRTRVFALL DKLPQPELAE IEDAAPVAVQ AAPQGTIAVT
G
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