| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0435 |
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| Symbol | |
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| ID | 4076078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 451273 |
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| End bp | 451926 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638005730 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_612430 |
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| Protein GI | 99080276 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.839793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACA ACTTGCCTAA AAAGCAGCCA CGAACCGCAC CGCCCGAAGC CCGGCGTGAG
CAGTTGATCG ATGCGACCAT CACTGCAATC AGCACATATG GTCTCTCGGG AACAACACTG
GCGAAGGTCA CGGCGGAGGC AGGTCTGTCG CTTGGGCTGG TTAATTTCCA TTTCAAAAGC
AAGGAGGCGC TTCTGACGGC AACGTTGACG CATCTTGCAG ACGAACACCG CGCCCTTTGG
TTCACAAGGT CCTCACAGCC GGATGTGTCT GCCGCTGACA AACTGAAGCT CATCGTCGAC
GCGCAGTTTC ACGCCAAGAT CTGCAACCGC CGCAAGCTTT CGGTCTGGTT TGCATTCTTC
GGTGAGAGTC GCCCGCGCAA AGCCTATCGG GAGCTGACTG GCCCCCTCGA TGAGGAGCGT
CAGATTGCGA CCTCTCGCTT GTGTGCGGAC ATCATAGCAG AGGGTGGCTA CAGCGGCATC
GATTCCGATA CGGTTTCGGC GATGCTCGAA AGCCTCTTTG ACGGGTTCTG GCTCAATATT
CTGATGTATC CAGACCGCTT TACACGGCAG TCAGCCAAGG CGCAGGTTCT GTCGTATCTG
CGGCTTTGCT TTCCGCAGCA CTTCACGTGC CTCGATGCCG AAACGTTTGC ATGA
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| Protein sequence | MSDNLPKKQP RTAPPEARRE QLIDATITAI STYGLSGTTL AKVTAEAGLS LGLVNFHFKS
KEALLTATLT HLADEHRALW FTRSSQPDVS AADKLKLIVD AQFHAKICNR RKLSVWFAFF
GESRPRKAYR ELTGPLDEER QIATSRLCAD IIAEGGYSGI DSDTVSAMLE SLFDGFWLNI
LMYPDRFTRQ SAKAQVLSYL RLCFPQHFTC LDAETFA
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