| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0430 |
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| Symbol | |
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| ID | 4076190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 442019 |
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| End bp | 442885 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005725 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612425 |
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| Protein GI | 99080271 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.739674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.919336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCC AGCATTCCCG CTCGGCCGCG CGCTTCATGA TGGCCCCTGC CGTCATTCTG
TTGCTCGGTT GGATGCTTGT TCCGCTGACA ATGACCCTGC TCTTCTCCTT CAAGAAATAT
CTGCCCCTGC GCGGGGGCGA TCTGGGATGG GTCGGTTTTG ACAATTACGT CCGCTTTGTA
TCGTCCTCCG CCTTCTGGCC CAGCGTGCAG GCGACGCTGC TGATCGTAGG CGGCGTGCTC
GTGATCACTG TGATCTTTGG CGTATTGCTT GCGCTCCTGC TGGACCAACC CATGTGGGGC
CAAGGCATTG TACGTATCCT TGTTATCGCG CCGTTTTTTG TGATGCCCAC CGTGTCGGCG
CTGGTTTGGA AGAACATGTT CATGGATCCC GTGAACGGGC TCTTTGCGCA TCTGTGGAAG
TTTTTCGGGG CAGAGCCGAT CGCGTGGCTC TCCGAAGCCT CGATGCAATC CGTGATCATA
ATCGTCAGCT GGCAATGGCT GCCTTTCGCG ACCCTGATCC TCCTGACGGC CATTCAGTCG
CTCGACCGCG AACAGCTTGA AGCGGCAGAG ATGGATGGGG CAAGCCCGCT TGCGCGCTTT
GGCTACATCA TTCTGCCCCA CCTCGGCCGG GCGATCACCG TGGTCGTCCT GATCCAGACG
ATTTTCCTGC TGTCGATCTT CGCCGAGATC TTTGTAACCA CCCAAGGCTC CTTTGGCACC
CGGACCCTGA CCTACCTGAT CTTCCAGCGT GTGCTGGAGA GCCAGAACGT CGGTCTTGGC
TCCGCTGGCG GTGTCTATGC CATCATCCTT GCCAATATTG TTGCCGCATT CCTGATGCGC
ATCGTCGGCA AGAACCTCGA CGCATAA
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| Protein sequence | MATQHSRSAA RFMMAPAVIL LLGWMLVPLT MTLLFSFKKY LPLRGGDLGW VGFDNYVRFV
SSSAFWPSVQ ATLLIVGGVL VITVIFGVLL ALLLDQPMWG QGIVRILVIA PFFVMPTVSA
LVWKNMFMDP VNGLFAHLWK FFGAEPIAWL SEASMQSVII IVSWQWLPFA TLILLTAIQS
LDREQLEAAE MDGASPLARF GYIILPHLGR AITVVVLIQT IFLLSIFAEI FVTTQGSFGT
RTLTYLIFQR VLESQNVGLG SAGGVYAIIL ANIVAAFLMR IVGKNLDA
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