| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0429 |
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| Symbol | |
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| ID | 4076189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 441173 |
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| End bp | 442003 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638005724 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_612424 |
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| Protein GI | 99080270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.188981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.648438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTT CCGTGACCCA ACACCGAAAA GCGATCAATA CCATCGCCGC CTGGTCGGTT
GGCCTGTTGA TCTTCTTCCC GATCCTCTGG ACGATCCTGA CCTCCTTCAA GACCGAGGCG
CAGGCAATCA ACGACCCGCC GCTGTTCCTC GCATTTGACT GGACGCTGGA AAACTACGCC
GTCGTACAGG AGCGCTCCAA CTACCTGCGT TTCTTGTGGA ACTCCATCGC GATTGCCGGG
GGCTCAACCC TGCTTGGCAT CCTAATCGCG GTGCCCGCAG CCTGGTCGAT GGCCTTTGTG
CCCTCCAAGC GCACCAAGGA TATCCTGTTG TGGATGCTCT CAACAAAAAT GCTGCCCGCC
GTAGGCGTGC TGTACCCGAT CTATCTGATC TTTATCCGCC TCGGACTGCT CGACAGTCGT
ACGGGTCTGA TTGTGGTGCT GATGCTGTGC AATCTGCCGA TCATCATCTG GATGCTCTAT
ACCTACTTCA AGGAAATCCC CGGCGAAATT CTCGAGGCAG CGCGGATGGA TGGCGCCACC
CTGAAAGAAG AAATTCTTTA TGTTCTGACA CCTATGGCCA TTCCAGGCAT CGCATCAACC
GTGCTGCTCA ACATCATCCT CGCCTGGAAC GAGGCCTTCT GGACCCTGAA CCTGACGGCC
GCCAAAGCGG CTCCGCTCAC GGCCTTTATC GCCAGCTACT CCAGTCCCGA AGGGCTGTTT
TACGCAAAAC TCAGCGCGGC CTCCACCATG GCCATCGCGC CGATCCTGAT CCTTGGCTGG
TTCAGCCAGA AACAACTTGT GCGCGGCCTG ACCTTTGGCG CTGTGAAATA A
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| Protein sequence | MARSVTQHRK AINTIAAWSV GLLIFFPILW TILTSFKTEA QAINDPPLFL AFDWTLENYA
VVQERSNYLR FLWNSIAIAG GSTLLGILIA VPAAWSMAFV PSKRTKDILL WMLSTKMLPA
VGVLYPIYLI FIRLGLLDSR TGLIVVLMLC NLPIIIWMLY TYFKEIPGEI LEAARMDGAT
LKEEILYVLT PMAIPGIAST VLLNIILAWN EAFWTLNLTA AKAAPLTAFI ASYSSPEGLF
YAKLSAASTM AIAPILILGW FSQKQLVRGL TFGAVK
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