| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0428 |
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| Symbol | |
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| ID | 4076188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 440156 |
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| End bp | 441160 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005723 |
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| Product | ABC transporter related |
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| Protein accession | YP_612423 |
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| Protein GI | 99080269 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.370162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.644909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGTA TTACACTCGA CAAAGTCACC AAAAGCTTTG GGGCGACAGA AGTTATCCCG
CCACTGGACC TGACGATTGA GGACGGTGAA TTCACAGTCT TCGTCGGCCC TTCGGGCTGC
GGAAAATCCA CCCTCCTGCG CCTCATTGCA GGGCTTGAGG ACGTGACCTC TGGTCAGATC
CGCATTGACG GTCAAGATGC AACCATGACG CCGCCTGCCA AACGCGGCCT TGCCATGGTG
TTTCAATCCT ACGCGCTCTA TCCGCATATG TCGGTGCGCA AAAACATCGC CTTTCCGATG
AAAATGGCAG GCATCGACGA CGCCGAGCAA ACGCGCCGCA TCGATGCCGC TGCAAAGGCG
CTCAATCTGA CCGACTATCT GGATCGCAAG CCCGGCCAGC TCTCTGGCGG ACAGCGTCAG
CGGGTTGCCA TTGGTCGTGC CATCGTGCGG GAACCTGCAG CGTTCCTCTT TGATGAGCCG
CTCTCCAATC TCGATGCCGC CCTGCGGGTC GGAATGCGGA TGGAGATCTC AGAACTTCAC
AAGAAACTCG CAACCACAAT GATTTACGTC ACGCATGACC AAGTCGAAGC CATGACGATG
GCTGACAAGA TCGTGGTGCT GCGCGCGGGT CACATCGAGC AGGTCGGCAG CCCGCTAGAG
CTTTATCACA GCCCCCGCAA CCTCTTTGTG GCAGGTTTCA TCGGCTCGCC CAAGATGAAC
TTTATCGAAG GCGACGAGGC CGCAAAATAC GACGCGCACA CCATTGGCGT GCGTCCCGAG
CATATCGACA TCGGCGAGAG CGGCGGCATG TGGTCGGGCG TGGTCGGGGT CTCCGAACAC
CTGGGGTCGG ATACCTTCTT TCACATCCAC GACACGGGTC TCGCCGAGAC CATCACCGTG
CGTGCCGACG GCGAGGTTGG CTTTCGCCAC GGCGATCGGG TCAGCCTGAC GCCACGTACG
GATGTGATGC ATCGCTTTGA CGCCCAAGGC CTGAGGATCC CCTAA
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| Protein sequence | MGRITLDKVT KSFGATEVIP PLDLTIEDGE FTVFVGPSGC GKSTLLRLIA GLEDVTSGQI
RIDGQDATMT PPAKRGLAMV FQSYALYPHM SVRKNIAFPM KMAGIDDAEQ TRRIDAAAKA
LNLTDYLDRK PGQLSGGQRQ RVAIGRAIVR EPAAFLFDEP LSNLDAALRV GMRMEISELH
KKLATTMIYV THDQVEAMTM ADKIVVLRAG HIEQVGSPLE LYHSPRNLFV AGFIGSPKMN
FIEGDEAAKY DAHTIGVRPE HIDIGESGGM WSGVVGVSEH LGSDTFFHIH DTGLAETITV
RADGEVGFRH GDRVSLTPRT DVMHRFDAQG LRIP
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