| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0427 |
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| Symbol | |
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| ID | 4076187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 439386 |
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| End bp | 440156 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005722 |
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| Product | sorbitol dehydrogenase |
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| Protein accession | YP_612422 |
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| Protein GI | 99080268 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.279316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.619878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTTG AAGGAAAAAC CGCCCTGATC ACCGGCGCAG CCCGTGGCAT CGGGCGCAGC
TTTGCCGAGG CCTACATTCG CGAAGGTGCC CGCGTCGCGG TCGCTGATAT CGACACTGAA
CGCGCGCGCC AGACGGCACT CGAGCTCGGC GACCAAGCGG TTGCGATAGA ACTGGACGTG
ACCTGCCAAG AGAGCATCGA GCGCGCGGTC GAGCAAACCG TCGAGGCCTT GGGGTGCATT
GATATTCTCG TCAACAACGC CGCGATTTTC ACCGCCGCAC CCATCACGGA AATCCACCGC
GACGATTTTG AACGCGTATT CGACATCAAT GTTGCCGGGA CGCTGTTCAC CATGCAGGCG
GTTGCGAAAC ACATGATTTC GCGTGGTGCC GGTGGCAAGA TCATCAATAT GGCCAGTCAA
GCCGGACGAC GCGGCGAGGC TCTGGTCGCT GTATACTGCG CCTCCAAGGC GGCGATCATC
AGTCTGACGC AGTCAGCGGG GCTGAACCTC ATTCAGCACG GGATCAATGT GAATGCCATC
GCCCCCGGTG TGGTGGATGG CGAGCACTGG GATGGCGTAG ATGCCTTTTT TGCAAAATAT
GAAAACAAAG CCCCCGGCGA AAAAAAACGC GAAGTGGGCG ACGCCGTGCC CTTTGGGCGC
ATGGGAACCG CAGATGATCT GACCGGTATG GCGATCTTTC TCGCCAGCGC TGAGGCCGAC
TATGTGGTGT CGCAGACCTA TAACGTCGAC GGCGGAAACT GGATGAGCTG A
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| Protein sequence | MRLEGKTALI TGAARGIGRS FAEAYIREGA RVAVADIDTE RARQTALELG DQAVAIELDV
TCQESIERAV EQTVEALGCI DILVNNAAIF TAAPITEIHR DDFERVFDIN VAGTLFTMQA
VAKHMISRGA GGKIINMASQ AGRRGEALVA VYCASKAAII SLTQSAGLNL IQHGINVNAI
APGVVDGEHW DGVDAFFAKY ENKAPGEKKR EVGDAVPFGR MGTADDLTGM AIFLASAEAD
YVVSQTYNVD GGNWMS
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