| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0417 |
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| Symbol | |
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| ID | 4076177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 427011 |
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| End bp | 428015 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005712 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_612412 |
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| Protein GI | 99080258 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.282235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTA AAATCGCGAT CAATGGATTT GGCCGGATCG GCCGCAACGT GCTGCGTGCA
CTTTTGGAGA ACGACACCAC CGACGTTGAG GTGGTGGCGA TCAACGATCT CGCCCCCCCG
GCAACCCAAG TCCACCTGCT GAAGTTCGAC AGCGTTCACG GCCGCCTCGA CGCAGAGGTT
ACAGTCGAGG GCGATACCAT GAAAGTGGGC CGCCATGAGA TCCGCCTGAC GGCCATCCGC
AACCCAGAAG AGCTGCCCTG GTCCGATGTC GATATCGCCT ATGAATGCAC TGGCCTCTTC
ACTACCCGCG ACAAAGCAGC CGCGCATCTG AAAAACGGCT CCAAACGCGT GCTGATTTCC
GCGCCGGGGA CCGAAGTTGA CCGCACCGTG GTCTTTGGCG TCAATGATCG CGACCTCACC
GCAGAGGACA TCGTGGTGTC CAACGCCTCC TGCACCACCA ACTGCCTTGC CCCGGTGGCC
AAGGTTCTGG ACGACGCCTT TGGGATCAAG ACCGGTTATA TGACCACGAT CCACGCCTAC
ACAGGCGACC AGCCGACCCA TGACACCACC CACAAGGATC TCTACCGCGC CCGCGCGGCA
GCGCTCTCGA TGATCCCAAC ATCTACCGGC GCGGCGCGCG CGATCTCCCT GGTGCTGCCA
CACCTCAAGG GCCGCCTTGA AGGTTCCGCC ATTCGCGTCC CGACACCAAA TGTCTCGGTG
GTGGACCTGA CGTTCCAGCC CGAGCGTGTC GCTTCGGTCG AAGAGATCAA CGCCGCGATC
GCGGCCGCCG CAAAAGAGGG CCCGCTTCAG GGCATTCTCG GCTATGAAGA GGCTCCACTG
GTGTCCATCG ACTTCAACCA CGACAAGCGG TCGTCGATCT TCGCCGCCCC ACAAACCGCC
GTGACCTCCG AGGGCCTGGT GCGCGTGGTG AGCTGGTATG ACAACGAGTG GGGCTTTTCG
AACCGCATGA TCGACACCGG CCGCGCCATG GGCAAATTCC TCTGA
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| Protein sequence | MTLKIAINGF GRIGRNVLRA LLENDTTDVE VVAINDLAPP ATQVHLLKFD SVHGRLDAEV
TVEGDTMKVG RHEIRLTAIR NPEELPWSDV DIAYECTGLF TTRDKAAAHL KNGSKRVLIS
APGTEVDRTV VFGVNDRDLT AEDIVVSNAS CTTNCLAPVA KVLDDAFGIK TGYMTTIHAY
TGDQPTHDTT HKDLYRARAA ALSMIPTSTG AARAISLVLP HLKGRLEGSA IRVPTPNVSV
VDLTFQPERV ASVEEINAAI AAAAKEGPLQ GILGYEEAPL VSIDFNHDKR SSIFAAPQTA
VTSEGLVRVV SWYDNEWGFS NRMIDTGRAM GKFL
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