| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0399 |
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| Symbol | |
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| ID | 4078793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 407651 |
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| End bp | 408277 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005694 |
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| Product | cytoplasmic chaperone TorD |
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| Protein accession | YP_612394 |
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| Protein GI | 99080240 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.372302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGG AGAGCCCGAT GACTGAGGCA GCCGTGACTG CAGAGACGGT CACTGAAGAG
GACCGTCTGC GCGCGGATCT TTACAACTAT CTCGGCCTGA TGCTTGCGGC CCCGCCGGCA
GAGATGCTGC TGGAACAGAC TGCTGGGCTC TCTGGGGACG ATACCCCCTT GGGGGAGGCG
ATCACCCAAT TGGCCCGGGT GGCCAAACGC ACCAAACCCG CCGCGGCTGA ACGCGAGTTC
AACGCGCTGT TCATCGGTTT GGGTCGTGGC GAGCTCTTGC CTTACGCAAG CTACTATCTG
ACGGGTTTTC TCAACGAAAA ACCTCTGGCG GCGTTGCGCA ACGACATGAG CGCTCGCGGC
TTGAGCCGCG CGCCGAACGT ATTCGAGCCC GAAGACAATA TCGCATCGCT CATGGAGATG
ATGGGGGCGA TGATCGTGGG GCGGTTCAAC ACTCCGGTCT CGTTGGCGGA ACAAAAAACC
TTTTTCAACA AGCACATCGG CCCGTGGGCT GCGCATTTCT TTGCGGATCT CGAAGGAGCG
AAAAACTCTG TGCTTTATGC CTCGGTGGGC GCGGTGGGTC GCGCCTTCAT GGAGATCGAG
GCCGAAGGAT TTCGGATGGG GGGCTGA
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| Protein sequence | MTQESPMTEA AVTAETVTEE DRLRADLYNY LGLMLAAPPA EMLLEQTAGL SGDDTPLGEA
ITQLARVAKR TKPAAAEREF NALFIGLGRG ELLPYASYYL TGFLNEKPLA ALRNDMSARG
LSRAPNVFEP EDNIASLMEM MGAMIVGRFN TPVSLAEQKT FFNKHIGPWA AHFFADLEGA
KNSVLYASVG AVGRAFMEIE AEGFRMGG
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