Gene TM1040_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0395 
Symbol 
ID4078789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp402983 
End bp404047 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content62% 
IMG OID638005690 
ProductMrp/NBP35 family protein 
Protein accessionYP_612390 
Protein GI99080236 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0489] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.616395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCATCA CCCGCGACGC CGTCCTCGAC GCCCTGAAGA CCCTCAATGA CCCTGTTAGC 
GGCAGCGACA TCGTCGCCGC AGGCATTGTC CGTGCCCTTA CTCTCGAAGG CAGCACCGTG
CGTTTTGTCC TCGAAATCGA TCCTGCAAAA TCCGACGCCT ACGCGCCTGT GCGCGATCAG
GCCGAGGCAG TGGTGAGCGC TCTGGCCGGG GTCGAAAAGG TCTCGGCCCT GATGACGGCC
CACAGCACCA AGGCGCCGCC GGATCTGAAG CCCAACAAAC CAGCAGAGCC GCAAGGCCCG
CAAAAGATCC CCGGCATTGC CAAGATCATC GCGGTTGCCT CTGGCAAGGG CGGCGTCGGG
AAATCGACAG TCTCTGCCAA CCTCGCCTGT GCACTGGCTC AGGCCGGGCG TCGCGTGGGG
CTTTTGGATG CAGATGTCTA TGGCCCCTCC CAGCCGAGGA TGCTCGGGGT GTCCGGTCGC
CCCGCCAGCC CGGATGGCAA GACCATCCTG CCGCTGCGCA ATCACGGCGT CACAATGATG
TCGATTGGCC TCATGACCAA TGATGACCAG GCGGTGGTCT GGCGTGGACC GATGCTGATG
GGCGCGCTGC AACAGATGAT GATGCAAGTG CAGTGGGGCG CACTTGACGT GTTGATTGTC
GACCTGCCGC CGGGCACCGG CGACGTGCAG ATGACACTGG CGCAAAAGGC GCAAGTGGAC
GGTGCGATCG TTGTTTCCAC ACCGCAGGAC GTTGCGCTTA TTGATGCCCG TAAAGGCATT
GATATGTTCC ACAAACTGAA TGTCCCTATC CTTGGTCTGA TCGAGAACAT GTCGACCCAT
ATCTGCTCCA ACTGTGGCCA TGAGGAGCAC ATCTTTGGCC ATGGTGGCGT TGCCGCCGAA
GCCGAGAAAC TGAATGTGCC GCTGCTCGCC GAGGTGCCCT TGCATCTTGA CGTTCGTCTG
GCGGCGGATG GCGGCGCACC GATCGTGGTG TCCAAACCTG ACAGCGCCCA GGCGCGGGCG
TTTCAGGACA TCGCGGCAGC CCTCTTGGAG CGTGGCGCCG CATGA
 
Protein sequence
MSITRDAVLD ALKTLNDPVS GSDIVAAGIV RALTLEGSTV RFVLEIDPAK SDAYAPVRDQ 
AEAVVSALAG VEKVSALMTA HSTKAPPDLK PNKPAEPQGP QKIPGIAKII AVASGKGGVG
KSTVSANLAC ALAQAGRRVG LLDADVYGPS QPRMLGVSGR PASPDGKTIL PLRNHGVTMM
SIGLMTNDDQ AVVWRGPMLM GALQQMMMQV QWGALDVLIV DLPPGTGDVQ MTLAQKAQVD
GAIVVSTPQD VALIDARKGI DMFHKLNVPI LGLIENMSTH ICSNCGHEEH IFGHGGVAAE
AEKLNVPLLA EVPLHLDVRL AADGGAPIVV SKPDSAQARA FQDIAAALLE RGAA